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The map label for this gene is ycaD [C]

Identifier: 50843109

GI number: 50843109

Start: 1787737

End: 1788948

Strand: Direct

Name: ycaD [C]

Synonym: PPA1641

Alternate gene names: 50843109

Gene position: 1787737-1788948 (Clockwise)

Preceding gene: 50843103

Following gene: 50843110

Centisome position: 69.83

GC content: 61.14

Gene sequence:

>1212_bases
GTGACTGATTCGACGCACGCAGATCCCGCCACCCCACCGGTGAAGTGGTCGTCGATCATCGTTTCGGCCTACCTACCGAC
GCTGATGTCCTCCCTGGGCTACGGCGCAGTGATTCCGCTCATCCCACTCACCGCAGTACATATCGGAGCATCGGCAGCCC
TCGCTGCCGCAATTGCCGCGCTTGTCGGTATCGGCCAAATCATCGGAGATGTGCCTGCCGGATGGCTCGTAACAAAGATC
GGTGAGAAATGGTCTCTAGTGATAGCCATGCTCATTGACGCGGTTGCGCTTGTGTCCATGGGGCTGGTGCACCACCTTGG
TTTGCTAGCTGTCGCGGTCTTTGTCAACGGCATGGCCGGCGCCGTGTACGGCATTGCCCGACAGAATTACCTGACGGTAG
CGATCCCATACCGATACCGAGCTCGCGCGCTGTCCACCCTCGGCGGAGTGTTCCGGGTGGGTTGGTTTGTCGGCCCCATG
GCGGGATCGTGGATTCTCCGCGAAGCCTCCATGTCATGGGCATACGGATTTGCATCCGTTGCCAGTGTTCTCGCCGCTGC
CGTGACCACCGTCATGCCCGACCTTCCCCCAGTCGATGTCCCACAAACTGCCGTTGACGATGCCCCCACCAAGATCTCGA
CGTGGACGATAGCCAAACAGAACTCCAAGGTCCTGTGGACGACGGGGTTGGGAGTGACAGCTCTCATGGTCGTTCGGTCC
GCGCGACGCTCCCTACTCCCGTTGTGGTGCCACGCCAACGGTCTTTCCCCAGCCACCACGGACCTTATCTATGCCTGGTC
GATGGCTGCTGACGTCCTACTCTTCCTGCCCGGCGGAGCCCTCATGGACAGATTCGGACGCTGGTGGGTGGCAGTGCCGT
CAATCTTCATCCAGGCCCTTGCACTCCTCACCTTGCCGCTAGCCCATACAGCGACGACTATCGGCATCGTCGCCCTCGCC
ATCGGTATTGGCAACGGCGCGAGTTCCGGCATCGTCATGACGCTGGGATCCGATGCCTCTCCCAATATCGGACGCCCACA
GTTCTTGGCAGCGTGGCGACTCCTCTCCGATACTGGCTCAGCAATGGGACCAATCGTGGTCACCCTTGTCACCCTAGCCT
GGCCATTGTCGGCCGCCAGCATCGTGATGTCGATCATCGGCCTGGTCGGCAGCTACTGGATGGGGCGCTGGGTGCCGCAC
GGCAAACGCTAA

Upstream 100 bases:

>100_bases
TATTCGACATACTATCGGGGTTCGGCCTTGATGGCCCAGCCGGCCCCAACCAGTAGCGAACATGCCTGCATGCATTTGTT
CGGCATCCTAGCCTGTCCCC

Downstream 100 bases:

>100_bases
TTGACGCCGTCCTCGCCCACCCGCTGTCCTAACTACCGACTAGGCTGTGATGCCGTGAAAGACATGCTGGTGTGGATCGA
TTGCGAGATGACCGGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Arabinose Efflux Permease Family Protein; Facilitator Transporter; MFS Transporter; Transporter Protein; Multidrug Efflux Protein; MFS Permease; Necrosis Inducing

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAALVGIGQIIGDVPAGWLVTKI
GEKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAGAVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPM
AGSWILREASMSWAYGFASVASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRS
ARRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQALALLTLPLAHTATTIGIVALA
IGIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGSAMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPH
GKR

Sequences:

>Translated_403_residues
MTDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAALVGIGQIIGDVPAGWLVTKI
GEKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAGAVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPM
AGSWILREASMSWAYGFASVASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRS
ARRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQALALLTLPLAHTATTIGIVALA
IGIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGSAMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPH
GKR
>Mature_402_residues
TDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAALVGIGQIIGDVPAGWLVTKIG
EKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAGAVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPMA
GSWILREASMSWAYGFASVASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRSA
RRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQALALLTLPLAHTATTIGIVALAI
GIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGSAMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPHG
KR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42109; Mature: 41978

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS01125 ROK ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
LVGIGQIIGDVPAGWLVTKIGEKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAG
HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPMAGSWILREASMSWAYGFASV
HHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRS
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHH
ARRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQAL
HHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHH
ALLTLPLAHTATTIGIVALAIGIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
AMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPHGKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDSTHADPATPPVKWSSIIVSAYLPTLMSSLGYGAVIPLIPLTAVHIGASAALAAAIAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
LVGIGQIIGDVPAGWLVTKIGEKWSLVIAMLIDAVALVSMGLVHHLGLLAVAVFVNGMAG
HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVYGIARQNYLTVAIPYRYRARALSTLGGVFRVGWFVGPMAGSWILREASMSWAYGFASV
HHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ASVLAAAVTTVMPDLPPVDVPQTAVDDAPTKISTWTIAKQNSKVLWTTGLGVTALMVVRS
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHH
ARRSLLPLWCHANGLSPATTDLIYAWSMAADVLLFLPGGALMDRFGRWWVAVPSIFIQAL
HHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHH
ALLTLPLAHTATTIGIVALAIGIGNGASSGIVMTLGSDASPNIGRPQFLAAWRLLSDTGS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
AMGPIVVTLVTLAWPLSAASIVMSIIGLVGSYWMGRWVPHGKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA