| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ybfG [H]
Identifier: 50843061
GI number: 50843061
Start: 1716068
End: 1718509
Strand: Reverse
Name: ybfG [H]
Synonym: PPA1591
Alternate gene names: 50843061
Gene position: 1718509-1716068 (Counterclockwise)
Preceding gene: 50843062
Following gene: 50843059
Centisome position: 67.12
GC content: 52.54
Gene sequence:
>2442_bases ATGGCAGATCAAATGGTGCTGAAAACTCAGCAGTGGCTGAATTCGACTTACGGCAATAAAACTGGGTTCGGCTCAGTCCA AGAAACCGGTAACACTGGCTGGGATACAATCAACGCACTCATCCGCGCTCTGCAAATCGAACTGGGTATTACAGCGACGG CAAACAATTTCGGTTCTGGAACACAGTCTCGATTCAAGTCTCGTTGGCCAAACGGCATTACTCAAACTTCTGGCTACGAC AATGTTCATGGGATTATTCAAGGAGCCTTGTGGTGCAAGGGATATCGAGCCGAATACGGTGGCATCACTCTTGAGTTTAC CGACCACTTGGCCGACTCTATTCGCCAGATGAAAGTCGATATTGGCCTTGGCGATACGAGCGCAACGGTCGATGTTGAAC TAATGATGGCGCTTCTGTCAATGAAACAGTTCCGGTTACTCTCTGCCTACGGCGGCAAGACAGCTATTCGTCAGGCACAG CAAGCGATTAACCGTGGGTACAAGAACTACACAGGGATCATTCCCACTGATGGCTTGTACGGGCGTGAAATGAACACGGC TTTAATCCAGGTCCTCCAAGCAATCGAAGGATACACACCTGCCGAAGCCACCGGGAATTTTGGTGCAGGCACTCGCTCCA AACTACGGACAATTAGTAGCGGCACTAACCAGTGGGTATGGCTAGCCACTGTGAGTCTGGTCTGCAACGGCTACTCCATT TTGCCGACCAGCACGTGGAACAGCGAAATCAGCAACACGCTGTGGCAGTTCCAGCAAGCACACGCCTTGCCAGTGACCGG GGTGGTCGACCCAACCACATGGATGAGCCTGCTCACTTCTAAAGGCGACCCCAATCGGCCATGTGTGGCTTGCGATACGC GCTTTGAGATCACTGACGAGCTTGCTGGACATCTTAAGGCTGATGGTTATCAGATCGTAGGCCGCTATCTCAGTGAACCC AACCAAAGCAGTAAGTCTGAGGCAGACTATTTCAAGGCGCTCCGCACAGGCGAGCTAGAGCGAATCGTTGGTCATGGGCT GAAGTATTTCCCAATTTTTCAAGAGTACTCAACTGAACTTAAGTACTTTAGTGTCGAAAATGGGCACCGTCATGCGAAAG AGGCCCAAACCGCTGCCCAACGACTTGGTGTTCCACCTACAGTGATCTACTTCGCCGTTGACTACGATGCCACGGATCCT CAGGTGACCAGCCACATCCTGCCCTACTTCAAGGCAGTAACGCAAAGCCTCGGCGGCGGCTACCGAGTGGGTATCTACGC CTCGCGAAACATCTGCACCCGGATAGCTCAGGCTGGATACGCGGTAGCATCATTCGTTTCTGACATGTCTACCGGATTCT CAGGTAATCTCGGTTTCCCCATCCCCGACAACTGGGTATTTGATCAGTTCCACGAAATCAGTGGATATCGGGGGAAATGG GATCTTGACCGCGTGGCATATTCGGGTCGCATGTCAGCCGATTCGTCGGTGCGCCACGCGCAGCCAGTGAATTACGACGC TCTAGATTTTCTCGATCTGATCGAAGCGCTTGAGAGCCGGTTCGAGGAATTGCGCGTGGTCTATAAGGACTACGCTTTCG GAGAGGATCCGATCACATCCGGCAGCTACGTTACTTGGGTCAAAGTTCCGACTTGGCGATGTGTCCTCAACTACCTATCA ACGGTCTACCTCAAGGGAAGTGCAAAGTGGTCCGCGGCAGCTGAAGCATATCGGGAGGCGGACGCGAAAAGGCTGGAAGA TGACACTCAAGCGTCTCAGATAATCTCTGCCTTGAATAAGTGGATTCGCTGCGATCGACAAGAATGGACGGACCCCGCAG GTGGTGCAGTAGATATCCCGCATATGAGCGTGACCACCCTGGGCTACATCAACCTGAACCCGCTCGTTCCTGATAAGTGG ACGGGATGGGCGGGTGACTTAGCTTCAGCGCTCGGTCCGATTCAAAAGGTTGTTGACCTGAATCCCGGCTCAAACATTAT TGCAATAGCAAGGGCTCTTGTTGGCCAAGGGGATAACTATAAGAATCACAGCGGACTTCAAGGTTTGACCATCCCCAATG ATCTGCCGAACAACTGCAACTACTCCGACCTGTGTAGCGACGGGGATGCGATCAAACTGGCTGCGATGCTGAAAGGCTCG GGAGCCGACGACCCCAACCTTCTGTCCCGAACGCTGAGGAGCTACTACAACAATCCAGTTTCGCTATTGCAGCGATTCAA GGCGATCTCTGAGAGTGTTGGTGCAAGCGACGGAGGAACCGCAAAGGACAAGTTCTTTGCAGAAATTGATGGCCCATTGG ATGACAGATACGTTGGCCTTCTCACAGACGGTTCCAATGGGGCATACGGCTACTCGGGCGTTGAGCCTAGCGAAGAAACC AAGAGGGCAGCATGTCAAGCTCTAGCTGAATTCATCTACTGA
Upstream 100 bases:
>100_bases GAGGGCAAAAAACTCGGAGCTTCTCATCCGGTGTTCTGGACCCCTCCGTGGCAGGTGTTCGCCTGCCTCGAGTTAACAAC TGATTTCTGAAGGAGGAATC
Downstream 100 bases:
>100_bases GTTTGTCATCTGCTTCGTGGCTGGGGCCAGGCGTAAGATACCTGGCCCCAGCCACTGCGGCATAAAGTGCCCAAGCACCC ACGAAGAAGACCAGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 813; Mature: 812
Protein sequence:
>813_residues MADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSGTQSRFKSRWPNGITQTSGYD NVHGIIQGALWCKGYRAEYGGITLEFTDHLADSIRQMKVDIGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQ QAINRGYKNYTGIIPTDGLYGREMNTALIQVLQAIEGYTPAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSI LPTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDELAGHLKADGYQIVGRYLSEP NQSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTELKYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDP QVTSHILPYFKAVTQSLGGGYRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKW DLDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITSGSYVTWVKVPTWRCVLNYLS TVYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNKWIRCDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKW TGWAGDLASALGPIQKVVDLNPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGS GADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGLLTDGSNGAYGYSGVEPSEET KRAACQALAEFIY
Sequences:
>Translated_813_residues MADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSGTQSRFKSRWPNGITQTSGYD NVHGIIQGALWCKGYRAEYGGITLEFTDHLADSIRQMKVDIGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQ QAINRGYKNYTGIIPTDGLYGREMNTALIQVLQAIEGYTPAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSI LPTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDELAGHLKADGYQIVGRYLSEP NQSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTELKYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDP QVTSHILPYFKAVTQSLGGGYRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKW DLDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITSGSYVTWVKVPTWRCVLNYLS TVYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNKWIRCDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKW TGWAGDLASALGPIQKVVDLNPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGS GADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGLLTDGSNGAYGYSGVEPSEET KRAACQALAEFIY >Mature_812_residues ADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSGTQSRFKSRWPNGITQTSGYDN VHGIIQGALWCKGYRAEYGGITLEFTDHLADSIRQMKVDIGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQQ AINRGYKNYTGIIPTDGLYGREMNTALIQVLQAIEGYTPAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSIL PTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDELAGHLKADGYQIVGRYLSEPN QSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTELKYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDPQ VTSHILPYFKAVTQSLGGGYRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKWD LDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITSGSYVTWVKVPTWRCVLNYLST VYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNKWIRCDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKWT GWAGDLASALGPIQKVVDLNPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGSG ADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGLLTDGSNGAYGYSGVEPSEETK RAACQALAEFIY
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fadG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015020 - InterPro: IPR017853 - InterPro: IPR002477 [H]
Pfam domain/function: PF08924 DUF1906; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 89133; Mature: 89001
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSG CCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC TQSRFKSRWPNGITQTSGYDNVHGIIQGALWCKGYRAEYGGITLEFTDHLADSIRQMKVD HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHEEE IGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQQAINRGYKNYTGIIPTDGLY ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC GREMNTALIQVLQAIEGYTPAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCCCEE LPTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDE EECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHH LAGHLKADGYQIVGRYLSEPNQSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTEL HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEHHHHCCCC KYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDPQVTSHILPYFKAVTQSLGGG EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC YRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKW EEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DLDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITS CHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSYVTWVKVPTWRCVLNYLSTVYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNK CCEEEEEECCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIRCDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKWTGWAGDLASALGPIQKVVDL HHHCCHHHCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC NPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGS CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCC GADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCEEEE LTDGSNGAYGYSGVEPSEETKRAACQALAEFIY EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure ADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSG CCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC TQSRFKSRWPNGITQTSGYDNVHGIIQGALWCKGYRAEYGGITLEFTDHLADSIRQMKVD HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHEEE IGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQQAINRGYKNYTGIIPTDGLY ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC GREMNTALIQVLQAIEGYTPAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCCCEE LPTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDE EECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHH LAGHLKADGYQIVGRYLSEPNQSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTEL HHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEHHHHCCCC KYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDPQVTSHILPYFKAVTQSLGGG EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC YRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKW EEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DLDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITS CHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GSYVTWVKVPTWRCVLNYLSTVYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNK CCEEEEEECCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIRCDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKWTGWAGDLASALGPIQKVVDL HHHCCHHHCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC NPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGS CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCC GADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCEEEE LTDGSNGAYGYSGVEPSEETKRAACQALAEFIY EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]