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The map label for this gene is 50843062

Identifier: 50843062

GI number: 50843062

Start: 1718901

End: 1719278

Strand: Reverse

Name: 50843062

Synonym: PPA1592

Alternate gene names: NA

Gene position: 1719278-1718901 (Counterclockwise)

Preceding gene: 50843063

Following gene: 50843061

Centisome position: 67.15

GC content: 67.46

Gene sequence:

>378_bases
ATGCCGGTCAAGCCTGCCCGTCCGTGTTCCCAGCCCGGCTGCCCGAACCTCACCCACGCCCGCTTCTGCGAAGCCCACGC
CAAGGCGGAGGACGAGCGCTACCGCAAGTGGCAGCGTGACCCGAAGATCAACCGACGTTATGGGGCCCGCTGGCGCAAGA
TTCGTACCGCCTACATCACCGCCCACCCCTTGTGCGAGGACTGCCTCGCGGCTGGCCGGTACACCCCGGCGCAGGAAGTC
CACCACGTCATCCCGTTGGAGCACGGCGGCACCCATGACCAGGCCAACCTCCGCAGTTTGTGTAAGCCGTGCCACTCCCG
CCAGTCGGCGCTCGACGGCGACCGGTGGAGGCAGACCCCGAGGATCTACACCTACTGA

Upstream 100 bases:

>100_bases
CAATGATGTAGGTGGTTGAAAAGTAGGAAAAGCCCCAGGGCAAGCCCGGTCATCGGCTGGGTGCCTTGGGGCTTTGCCGT
GTCCGGGAAAGGGGTGCGTG

Downstream 100 bases:

>100_bases
AATCTGCGCCACGTCGCGCCACGTCGCGCCGAGGTTGCGAAACCTCAAAGATGCCCACCTCGGTGCTGATCGGCAGACAC
GGGGGAACCTGGCGGCGCTG

Product: phage associated protein

Products: NA

Alternate protein names: Phage Associated Protein; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Family Protein; Restriction Endonuclease; Bacteriophage Holin Protein; Holin Protein; Bacteriophage Endonuclease; Prophage; Phage-Like Protein; HNH Endonuclease Domain Protein; Phage Endonuclease; Phage Holin

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYITAHPLCEDCLAAGRYTPAQEV
HHVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTPRIYTY

Sequences:

>Translated_125_residues
MPVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYITAHPLCEDCLAAGRYTPAQEV
HHVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTPRIYTY
>Mature_124_residues
PVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYITAHPLCEDCLAAGRYTPAQEVH
HVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTPRIYTY

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14544; Mature: 14412

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYIT
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AHPLCEDCLAAGRYTPAQEVHHVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTP
HCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC
RIYTY
CCCCC
>Mature Secondary Structure 
PVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYIT
CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AHPLCEDCLAAGRYTPAQEVHHVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTP
HCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCC
RIYTY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA