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The map label for this gene is bedB [H]

Identifier: 50843023

GI number: 50843023

Start: 1665435

End: 1665758

Strand: Reverse

Name: bedB [H]

Synonym: PPA1547

Alternate gene names: 50843023

Gene position: 1665758-1665435 (Counterclockwise)

Preceding gene: 50843024

Following gene: 50843022

Centisome position: 65.06

GC content: 60.19

Gene sequence:

>324_bases
ATGTCCGTCGCCACTACCCTTTCGGCCCTGAAAGAGAACTCCCCGCAGGAGTTCGAGGTCGACGGCATCGACGTCGTTCT
GGTGCGCACCGACGGCGAGGTCTTTGCCGTTGGAGCTACTTGTACTCACGCCGAGGTGCCAATGGTCGATGGAGAGGTCG
TCGATTGCGGCTTGGAGTGTTACATGCACGGCTCCTTCTTCGACCTGCGTACAGGGGAGCCACGTAGCCTCCCCGCCACC
GAACCACTTCCCGTTTACCCCGTGACTATCGACGGCGACAACGTTCTCGTCGACGTCGCCAATCCCATCATCAAGGAGTC
CTGA

Upstream 100 bases:

>100_bases
GTAAGATCGGCGTGCCCGAGATCTCTGAAGAGCTTGTGGCCCGCATTGAGGCCGAACTTGTCGAGAGCCTCGGATCCTCC
CCCTCGGTGGAGGAGGGCTG

Downstream 100 bases:

>100_bases
ACCACCATGGCAACCCTGCAGATCAATGACCTTCACGTCGACGTTGAGACCGAGGCCGGTCCCAAGCAGATCCTCAAGGG
AGTCGACCTGACTATCAATT

Product: putative dioxygenase ferredoxin subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSVATTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLECYMHGSFFDLRTGEPRSLPAT
EPLPVYPVTIDGDNVLVDVANPIIKES

Sequences:

>Translated_107_residues
MSVATTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLECYMHGSFFDLRTGEPRSLPAT
EPLPVYPVTIDGDNVLVDVANPIIKES
>Mature_106_residues
SVATTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLECYMHGSFFDLRTGEPRSLPATE
PLPVYPVTIDGDNVLVDVANPIIKES

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=76, Percent_Identity=35.5263157894737, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11439; Mature: 11308

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVATTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLEC
CCHHHHHHHHHCCCCCEEEECCEEEEEEEECCCEEEEECEECCCCCCCCCCEEEEEEEEE
YMHGSFFDLRTGEPRSLPATEPLPVYPVTIDGDNVLVDVANPIIKES
EECCCEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SVATTLSALKENSPQEFEVDGIDVVLVRTDGEVFAVGATCTHAEVPMVDGEVVDCGLEC
CHHHHHHHHHCCCCCEEEECCEEEEEEEECCCEEEEECEECCCCCCCCCCEEEEEEEEE
YMHGSFFDLRTGEPRSLPATEPLPVYPVTIDGDNVLVDVANPIIKES
EECCCEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]