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The map label for this gene is sufD [C]

Identifier: 50843024

GI number: 50843024

Start: 1665758

End: 1667032

Strand: Reverse

Name: sufD [C]

Synonym: PPA1548

Alternate gene names: 50843024

Gene position: 1667032-1665758 (Counterclockwise)

Preceding gene: 50843025

Following gene: 50843023

Centisome position: 65.11

GC content: 62.2

Gene sequence:

>1275_bases
GTGCGGTCGGCTGATCCGACCCCGGCCCCAACGAACCCCACTTTTTCGAGAAAGAGAGACACCGCGTTGAGCGCACCAGT
TGCCGCGCCCGGCAAGGGCCACAACGTCACTATCGAAAACGACGTCGAATCCCATCTGCACCCCACCCCATCATGGGAGA
TCGCTGACCACCCCATGCCCACCGGGCGCGAGGAGATTTGGCGGTTCACCCCGATTAAGACCTTCACACCGGTTCTGTCC
GAGGTCGCCCTCGAGCCACGTCAGGAGGCCAGCGTCATCGACGTCGACGTCAAGGGGGCTGACGGCATCACCGTCACCGA
CCTGGCCACGAGTGAGCTGAAGGACATGGCCGAGACCCCGCAGGATCGTCTGTCGGCCTTGGCTGCGGCTGACCCGCACG
CCGTCAATCGCCGCGTCGTCATCCCAGCCGAGACCTCCCTCAAGGCTCCGGTCGAGGTCACTGTTGCCGGTCACAACGAT
GACATCGCCTGCCACCACAACGTGGTCGTCGAGATTGGTAATCATGCCGAAGTTACTGTCATTGTGCGCCACCGTGGCGT
GGCTAACCTTGGTGAGAACTGGACGTTCCGTATTGGTGATGGTGCACAGGCTACGGTGCTTTTCGTCCAGGAGTGGGATG
ATGCTGCTATCCACGGGGCTCAGGTCTCTTTTGAGATTGGCCGCGACGCCACCGTCCGCACCGCCCAGGCCAGCTTCGGC
GGCAAAGCCGTGCGCATCTGTCAGACGGCCTCCTACAACGGCCCCGGCGGAAATCTGACTCAGCTCGGCGCCTACTTCGC
CGATGCCGGTCAGCACATCGAGCACCGTTTGTTTGTCGATCACAACGCCCCTAGCACCGAGTCTCACGTGGACTTCCGCG
GCTGTTTACAGGGCAAGGATGCGCACTCAGTGTGGATCGGTGACGTGCTGATCCGCCCGGTGGCAGAGGACATTGACACC
TACGAGTCAAATAAGAATCTCGTCCTCACCGAGGGCTGTCGTGCCGACGCGGTACCAAACTTGGAGATCCAGACCGGCAA
TATTCGCGGCGCCGGACACTCGGCCTCCACTGGCCGTTTCGACGCCGAGCAGCTGTTCTACCTGCAATCGCGGGGTGTCG
AGGAGGCTGAGGCCCGCCGCCTTGTCGTGCACGGTTTTTTCACCGACATCGTCCGTAAGATCGGCGTGCCCGAGATCTCT
GAAGAGCTTGTGGCCCGCATTGAGGCCGAACTTGTCGAGAGCCTCGGATCCTCCCCCTCGGTGGAGGAGGGCTGA

Upstream 100 bases:

>100_bases
ATGGCCATGATCGTGCGCGGATTTATCGAGCCTATCGCCAAGGAGTTGCCGATGGAGTACGCCCTGGAGCTCAACCGACT
CATCGAACTGCAGATGGAGG

Downstream 100 bases:

>100_bases
TGTCCGTCGCCACTACCCTTTCGGCCCTGAAAGAGAACTCCCCGCAGGAGTTCGAGGTCGACGGCATCGACGTCGTTCTG
GTGCGCACCGACGGCGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRSADPTPAPTNPTFSRKRDTALSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMPTGREEIWRFTPIKTFTPVLS
EVALEPRQEASVIDVDVKGADGITVTDLATSELKDMAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHND
DIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWTFRIGDGAQATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFG
GKAVRICQTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDT
YESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEIS
EELVARIEAELVESLGSSPSVEEG

Sequences:

>Translated_424_residues
MRSADPTPAPTNPTFSRKRDTALSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMPTGREEIWRFTPIKTFTPVLS
EVALEPRQEASVIDVDVKGADGITVTDLATSELKDMAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHND
DIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWTFRIGDGAQATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFG
GKAVRICQTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDT
YESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEIS
EELVARIEAELVESLGSSPSVEEG
>Mature_424_residues
MRSADPTPAPTNPTFSRKRDTALSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMPTGREEIWRFTPIKTFTPVLS
EVALEPRQEASVIDVDVKGADGITVTDLATSELKDMAETPQDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHND
DIACHHNVVVEIGNHAEVTVIVRHRGVANLGENWTFRIGDGAQATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFG
GKAVRICQTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKDAHSVWIGDVLIRPVAEDIDT
YESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRFDAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEIS
EELVARIEAELVESLGSSPSVEEG

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=381, Percent_Identity=22.0472440944882, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45743; Mature: 45743

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSADPTPAPTNPTFSRKRDTALSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCC
TGREEIWRFTPIKTFTPVLSEVALEPRQEASVIDVDVKGADGITVTDLATSELKDMAETP
CCHHHHEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHCC
QDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHNDDIACHHNVVVEIGNHAEVTV
HHHHHHHHCCCCHHHCCEEEEECCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEE
IVRHRGVANLGENWTFRIGDGAQATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFG
EEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEECEEEEEEECCCCEEEEEHHCCC
GKAVRICQTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKD
CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCC
AHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRF
CCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCEECCCCCCCCCCC
DAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLGSSPS
CHHHHHHHHHCCCCCHHHCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
VEEG
CCCC
>Mature Secondary Structure
MRSADPTPAPTNPTFSRKRDTALSAPVAAPGKGHNVTIENDVESHLHPTPSWEIADHPMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCC
TGREEIWRFTPIKTFTPVLSEVALEPRQEASVIDVDVKGADGITVTDLATSELKDMAETP
CCHHHHEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHCC
QDRLSALAAADPHAVNRRVVIPAETSLKAPVEVTVAGHNDDIACHHNVVVEIGNHAEVTV
HHHHHHHHCCCCHHHCCEEEEECCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEE
IVRHRGVANLGENWTFRIGDGAQATVLFVQEWDDAAIHGAQVSFEIGRDATVRTAQASFG
EEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEECEEEEEEECCCCEEEEEHHCCC
GKAVRICQTASYNGPGGNLTQLGAYFADAGQHIEHRLFVDHNAPSTESHVDFRGCLQGKD
CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCC
AHSVWIGDVLIRPVAEDIDTYESNKNLVLTEGCRADAVPNLEIQTGNIRGAGHSASTGRF
CCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCEECCCCCCCCCCC
DAEQLFYLQSRGVEEAEARRLVVHGFFTDIVRKIGVPEISEELVARIEAELVESLGSSPS
CHHHHHHHHHCCCCCHHHCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
VEEG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]