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The map label for this gene is 50843013

Identifier: 50843013

GI number: 50843013

Start: 1655239

End: 1656045

Strand: Direct

Name: 50843013

Synonym: PPA1535

Alternate gene names: NA

Gene position: 1655239-1656045 (Clockwise)

Preceding gene: 50843012

Following gene: 50843014

Centisome position: 64.65

GC content: 59.85

Gene sequence:

>807_bases
GTGGCGCTGACACTGCTCGTCATTGTCCTGAGCCTGGTCATGATCCGGCTGGGACAGTGGCAGCTGCACCGGTTGTCAGG
GCGTCGCGAGGCCAACAACATCATCCGCACCAACCACAGCAAACCGCCGGTCGAATGGTCAACTCTCATGGGCGACCACG
AGGTGACGCCACAGCAACAGTGGCGGCCCGTCACCATCACTGGCACTTTCGATACCGCACACGAACTCCAAGTGCGCTAC
CGGAGCAACGACGATGATAATGGGTCAGAAATCGTTACCCCCATCGTCACGAAGGACAGCCGCCACGTCCTCATTGATCG
TGGTTTCCTCAAGCGCTCCTCACATGAGGGCGACGCGCAGACCCTACCTCCAGCCCCCAACGGAGTCGTGACAGTAACTG
GCCTCGTCAAAGGTAATGAGCACGGAAAACCAACCGCCACCGACCCCGTGGAGGGCAAGGTTCGTCTCATTAACTCCGAC
GCCATCGGTAAGGCGCAGGGGATCACATACGTCAGCGGATACATCTCAACAACGTCGATGGCACCAGCACAACGTGATCT
GGTTCCCCACGAGCTTCCGAAACTCGACGATGGCCCCCATCTGTCCTATGCCATCCAGTGGTTCTGTTTCACGGCTATCG
CGGTCATTGGACTGTTCGTCCTGATCCGAGGGGATATTAAGGACCGACGCAAACGCCGGGCCAAAGCGGCTCGTTCAGCC
GCTCAGCGAGCTGTCAGCGGCCCGGAACCGAATCGCCATGACGCGTCACACAACCGCGGCGCGAAGACACCAGGGGCCCA
CACGTGA

Upstream 100 bases:

>100_bases
CGGTCGCGCAGACGCAGCAAATAGCAAAGCCCAGTCGTGGGGCATTACTGGGAATCGACCAACTAGGCTCGGCAGCGTGA
AGAAGCTGTGGGTGAGATGA

Downstream 100 bases:

>100_bases
CGCCGACACTTTCCGTAGTCCTGCCGTGGCTGATCTGTCCCACCTGTCAGCGGCGCGGCTGTGAAAACCCGTTGGCCCGT
GATGGGAGGTCTCTGCGATG

Product: membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGDHEVTPQQQWRPVTITGTFDTAHELQVRY
RSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKRSSHEGDAQTLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSD
AIGKAQGITYVSGYISTTSMAPAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKRRAKAARSA
AQRAVSGPEPNRHDASHNRGAKTPGAHT

Sequences:

>Translated_268_residues
MALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGDHEVTPQQQWRPVTITGTFDTAHELQVRY
RSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKRSSHEGDAQTLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSD
AIGKAQGITYVSGYISTTSMAPAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKRRAKAARSA
AQRAVSGPEPNRHDASHNRGAKTPGAHT
>Mature_267_residues
ALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGDHEVTPQQQWRPVTITGTFDTAHELQVRYR
SNDDDNGSEIVTPIVTKDSRHVLIDRGFLKRSSHEGDAQTLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSDA
IGKAQGITYVSGYISTTSMAPAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKRRAKAARSAA
QRAVSGPEPNRHDASHNRGAKTPGAHT

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 29481; Mature: 29350

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGDHEVTPQQQ
CHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCEECCCCCCCCCHHHHCCCCCCCCHHC
WRPVTITGTFDTAHELQVRYRSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKRSSHEGDAQ
CCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCHHHCCCCCCCCC
TLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSDAIGKAQGITYVSGYISTTSM
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHECCCC
APAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKRRAKAARSA
CCHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQRAVSGPEPNRHDASHNRGAKTPGAHT
HHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALTLLVIVLSLVMIRLGQWQLHRLSGRREANNIIRTNHSKPPVEWSTLMGDHEVTPQQQ
HHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCEECCCCCCCCCHHHHCCCCCCCCHHC
WRPVTITGTFDTAHELQVRYRSNDDDNGSEIVTPIVTKDSRHVLIDRGFLKRSSHEGDAQ
CCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCHHHCCCCCCCCC
TLPPAPNGVVTVTGLVKGNEHGKPTATDPVEGKVRLINSDAIGKAQGITYVSGYISTTSM
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHECCCC
APAQRDLVPHELPKLDDGPHLSYAIQWFCFTAIAVIGLFVLIRGDIKDRRKRRAKAARSA
CCHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQRAVSGPEPNRHDASHNRGAKTPGAHT
HHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]