| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843012
Identifier: 50843012
GI number: 50843012
Start: 1654792
End: 1655136
Strand: Direct
Name: 50843012
Synonym: PPA1534
Alternate gene names: NA
Gene position: 1654792-1655136 (Clockwise)
Preceding gene: 50843009
Following gene: 50843013
Centisome position: 64.63
GC content: 61.16
Gene sequence:
>345_bases GTGAGTGACGCAGCACGGGTTCGGTGGCGTCGAGGGCACCGCAACGCCCGGCATTCGATCACGTCTGCCAAGAGATCAGC CAGTGAAGACCTCGAGATGCGTCAGCGACGCTACTTATGGTCGATGCTCGTGCGAACAGTATGCTTTATCGGACTCGTCA TCACCCCGAGTCCATGGCGGTGGAGCTTCCTGGTGGGGGCAGCCGTCATCCCTGCCATCGCCGTGGTGCTCGGCAATGCC GCCGACCGACGCACCACTGACACTCTGCCGTCTCAGCAAAGCACAGAATCTCAAGGCGAGCTCGGCTCGGCCATGACCAT TCACGGCGAAGTCGACGAAAACTGA
Upstream 100 bases:
>100_bases GCCCCGGGGTGTCTAGACTCATAGAATGAACCTATCGCACGCTACGACCAAGAGTTGGGAAGGCTCGACCTGATCAACGC GACGCACCTAGGCTGGACAG
Downstream 100 bases:
>100_bases TCCGGTCGCGCAGACGCAGCAAATAGCAAAGCCCAGTCGTGGGGCATTACTGGGAATCGACCAACTAGGCTCGGCAGCGT GAAGAAGCTGTGGGTGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSDAARVRWRRGHRNARHSITSAKRSASEDLEMRQRRYLWSMLVRTVCFIGLVITPSPWRWSFLVGAAVIPAIAVVLGNA ADRRTTDTLPSQQSTESQGELGSAMTIHGEVDEN
Sequences:
>Translated_114_residues MSDAARVRWRRGHRNARHSITSAKRSASEDLEMRQRRYLWSMLVRTVCFIGLVITPSPWRWSFLVGAAVIPAIAVVLGNA ADRRTTDTLPSQQSTESQGELGSAMTIHGEVDEN >Mature_113_residues SDAARVRWRRGHRNARHSITSAKRSASEDLEMRQRRYLWSMLVRTVCFIGLVITPSPWRWSFLVGAAVIPAIAVVLGNAA DRRTTDTLPSQQSTESQGELGSAMTIHGEVDEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12751; Mature: 12619
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAARVRWRRGHRNARHSITSAKRSASEDLEMRQRRYLWSMLVRTVCFIGLVITPSPWR CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WSFLVGAAVIPAIAVVLGNAADRRTTDTLPSQQSTESQGELGSAMTIHGEVDEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SDAARVRWRRGHRNARHSITSAKRSASEDLEMRQRRYLWSMLVRTVCFIGLVITPSPWR CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WSFLVGAAVIPAIAVVLGNAADRRTTDTLPSQQSTESQGELGSAMTIHGEVDEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA