| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is srlE [H]
Identifier: 50842963
GI number: 50842963
Start: 1602846
End: 1603895
Strand: Direct
Name: srlE [H]
Synonym: PPA1485
Alternate gene names: 50842963
Gene position: 1602846-1603895 (Clockwise)
Preceding gene: 50842962
Following gene: 50842964
Centisome position: 62.6
GC content: 61.62
Gene sequence:
>1050_bases ATGACCGAGTACCGCTCCGTCACCGTTTCCCATGGCTCCGGCGGCTACGGCGGCCCCCTCACCATCACCCCTACCGAGGC TAAACACAAGCTCGTCTACATCGTCGGCGGAGGCGTCCGGCCCCCGGTCGTTGATCGCATCGCCGAGCTGTCTGGTGCCG AACCGGTCAATGGGTTTAACACCTCCATCCCCGACGAGGAGATGATGGCCGTCATCATCGACTGCGGGGGGACCCTAAGG TGCGGAATCTACCCTCGCAAGGGAATCCCGACTATCAACGTCATGCCAACCGGTAAGAGCGGTCCGCTGGCCCAATACAT CAACGAGTCGATCTACGTCTCCGCCGTCGACGTCGACCAGGTCCGGTTGGCCGACTCACCTACATCCTCCGCCACTGTCA CCTCCCCCGCTATAGCCGCCGCTGCCGCGCCACGGTCAAAAGCCGGAACAGCAGGCACCGTCCAGGGGGAATGGAGCACT GACAAGAAGATTTCCGAAGTCGTCGCCGAGAAGAAGAACAAGACCGTCATGGACAAGATCGGCCTGGGCGCCGGCAAGGT CATCTCGGTGTTCTACCAAGCCGCTCGAGACGCGGTGCAGGCCATGCTGACCACCATCATCCCCTTCATGGGGTTCGTAG CCATGCTTATCGGCATCATCAACGCCTCCGGATTCGGTACCTGGTTCACCAAACTTCTCATCCCGCTAGCCGGCAACGGC ATCGGGCTCATCGTCCTTGGCCTCATCTGCTCGCTGCCCTTCCTGTCGCCCCTGCTCGGCCCAGGAGCCGTCATCGGTCA GATCATCGGAACTCTCATCGGCGTAGAGATCGGCAAGCACAACATCCATCCCAGCTTGGCCCTTCCAGCGCTGTTCGCCA TTAACACCCAGAACGCCTGCGACTTCATCCCGGTCGGCCTAGGACTAGCTGAGGCTGCCCCGGAAACAGTCGAGGTTGGC GTCCCCAGCGTCTTGTACTCGCGATTCCTTAACGGCGTCCCACGAGTCGCCATCGCCTGGCTGTGCAGCATCGGCCTGTA CGCATCCTGA
Upstream 100 bases:
>100_bases GACTTAACTACCAGATACGTGAGCAGGCAGCAGAAGGTCATCCTCCCCGACACCATGGACGGGAAGATCGTCCACGTCGA CACCCTTGTGGAGGCCTGAG
Downstream 100 bases:
>100_bases CACTCAAACCTGATCCGGAGAACATCAATGTCTGTCATCTATCGCAATCAGATCTGCGCCGTCGGCTCGCAGGCCGAGTC CTTTCTCAGCGAGAAAATGC
Product: PTS system, glucitol/sorbitol-specific IIBC component
Products: NA
Alternate protein names: EII-Gut; PTS system glucitol/sorbitol-specific EIIB component [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFNTSIPDEEMMAVIIDCGGTLR CGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQVRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWST DKKISEVVAEKKNKTVMDKIGLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNACDFIPVGLGLAEAAPETVEVG VPSVLYSRFLNGVPRVAIAWLCSIGLYAS
Sequences:
>Translated_349_residues MTEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFNTSIPDEEMMAVIIDCGGTLR CGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQVRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWST DKKISEVVAEKKNKTVMDKIGLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNACDFIPVGLGLAEAAPETVEVG VPSVLYSRFLNGVPRVAIAWLCSIGLYAS >Mature_348_residues TEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFNTSIPDEEMMAVIIDCGGTLRC GIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQVRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWSTD KKISEVVAEKKNKTVMDKIGLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNGI GLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNACDFIPVGLGLAEAAPETVEVGV PSVLYSRFLNGVPRVAIAWLCSIGLYAS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3732
COG function: function code G; Phosphotransferase system sorbitol-specific component IIBC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994905, Length=348, Percent_Identity=50.5747126436782, Blast_Score=323, Evalue=1e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011638 - InterPro: IPR011618 - InterPro: IPR004702 [H]
Pfam domain/function: PF07663 EIIBC-GUT_C; PF03612 EIIBC-GUT_N [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 36143; Mature: 36011
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS51102 PTS_EIIB_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFN CCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCC TSIPDEEMMAVIIDCGGTLRCGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQ CCCCCHHHEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCC VRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWSTDKKISEVVAEKKNKTVMDKI EEECCCCCCCCEECCCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHH GLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNAC HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCC DFIPVGLGLAEAAPETVEVGVPSVLYSRFLNGVPRVAIAWLCSIGLYAS CEEEECCCHHHCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TEYRSVTVSHGSGGYGGPLTITPTEAKHKLVYIVGGGVRPPVVDRIAELSGAEPVNGFN CCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCC TSIPDEEMMAVIIDCGGTLRCGIYPRKGIPTINVMPTGKSGPLAQYINESIYVSAVDVDQ CCCCCHHHEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCC VRLADSPTSSATVTSPAIAAAAAPRSKAGTAGTVQGEWSTDKKISEVVAEKKNKTVMDKI EEECCCCCCCCEECCCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHH GLGAGKVISVFYQAARDAVQAMLTTIIPFMGFVAMLIGIINASGFGTWFTKLLIPLAGNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC IGLIVLGLICSLPFLSPLLGPGAVIGQIIGTLIGVEIGKHNIHPSLALPALFAINTQNAC HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCCC DFIPVGLGLAEAAPETVEVGVPSVLYSRFLNGVPRVAIAWLCSIGLYAS CEEEECCCHHHCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9572925 [H]