| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is recG [H]
Identifier: 50842945
GI number: 50842945
Start: 1581410
End: 1583659
Strand: Reverse
Name: recG [H]
Synonym: PPA1466
Alternate gene names: 50842945
Gene position: 1583659-1581410 (Counterclockwise)
Preceding gene: 50842946
Following gene: 50842943
Centisome position: 61.86
GC content: 61.11
Gene sequence:
>2250_bases ATGGGTCGATACGGTGACGATGTGAATGCAGTGACCAGGTGGCGTACCCGCACCCAGAAGGAGCTTCATCGTCCCTTAGC GGAGGCGGTGGGAGCCAAGACGGCCAAGGCCTTCTCTGCGCTGCATGTTGGCACGGTGGGAGAGGCCCTCGGTCATCTTC CGCGTCGCTACCTTACCGGCACCGAAACCACCGACTTGTCCCACTTAGTCATTGACACTGAAGTCGCCTTGGTGGCCGAT GTTGTCGGCGTCGAGGTTCACACCAACAAGACTGTCACTGGCAGGGAGAGACGCCCGCGTCAACGTCTGGAAGTCATGCT TTCTGACGGTAAAGCGCGCCTGCCCGTTACGTTCTTCGGCAAACCCCACATCGTTTCCTACTGGCAACGCATTTTTTCGG CCCATACTCACGGCATCTTTGTCGGCAAGGTGGGGGAGTTCCGCGGGAACCCGCAGCTCGTCCACCCCGACTTCGTCATG ATTGACCGCAACGGGAAGGTCGTGGCAGGTCGCGAGGAGGGCAAGGTGATGGCTGCCCAGGTACAACGTCATGGTTTGCT GGGCCTTTACCCGCAGACGTCGAAATTGCGTACCTGGGAAATCGCCTCAGTGGAGTCGATGCTGCTCGAATCCACGCCCG AACTCGAGGACACCCTGCCTGAATGGTTACGTCAAGAAGCTGACCTACCGAGTTTATGGGAGGCTTACCACGCCATCCAT TACCCGCATTCGGTGGCTGAGGCTGATCGCGGCGCCGAACGACTTATCTGGGAAGAGGCGATAGCCACCCAGGTGACGAT GGCGGTGCGACGCCGCAGTGCAGAGCGTCATGATGCCCCGGTGTGTTCGCGTCGCGACGGCGGATTGCTGGTAGCCTTTG AGGATCGCCTGCCCTTTACCCCGACTGTCGGCCAGGACGAGGTGAGTCGGGTGATTGACGCCGACCTCTCGGCAGATCGT CCCATGCACCGATTATTGCAAGGAGAAGTTGGCTCGGGGAAAACCTTCGTTGCGCTGCGAGCGATGTTGCAGGTTGTTGA CGCTGGGCACCAGGCTGTCCTGCTGGCGCCGACCGAAGTCCTTGCTCAGCAGCATTACCGAACCATTATCAATATGTTGG GCGACTTGGCGTCCGGCGAGGGATTGGATGCCCCGGAGATCTCCACGGGTGTGGCGCTACTGACCGGCTCGATGAAGGCT GCGGGCACCCGGGCGGCACTGGCTGATATTGCCTCAGGAGCCGCTGGAATTATCGTCGGCACCCATTCCCTGCTGTCGGG CCGAGTGATTTACAACGACATTGGATTAGTCGTCGTCGATGAGCAGCATCGCTTCGGCGTTGAGCAACGCAGTGTTCTCA CTACTGGGGAGGGCGCACGCCCCCACGAACTCGTTCTCACCGCGACCCCGATTCCGCGAACGGTGGCGATGACGGTCTTC GGTGACCTCGAGGTCTCGAGCTTGAGAGAATTACCGACTGGACGTGCCGACGTTCAGACCACGGTCGTCGACCTGCCCGC CCACGGATCCTGGCTCACCCGCGCCTGGCAGCGGATCCGGGAGGAATGTGATGCCGGACATCAGGTGTTTGTGGTCTGCC CTCGCATCAATTCCGACGACGCTGACGACGTCGAAGGTGGGCGCCCTCCCGCAGCTGCCGTCGAAGAGCTCGCTCCTCAA CTGGCGACGGGACCTCTCGCCGGATTAAGAGTTGAGGCCCTGCACTCCCGGCTAGATTCGTCCGAGAAAGACCTCGTTAT GGACAGGTTTATCAAGGGTGAGTCGCAGGTGCTTATCTCCACAACGGTGATTGAGGTCGGCGTCGACGTCCCCAATGCCA CCATGATGGTCATCATGGACGCCGACCGGTTTGGCGTCTCGCAGCTGCACCAGTTGCGCGGTCGGATCGGTCGAGGCAAC CTGCCGGGGCTCTGCCTGCTGGTGACGACGGCGCCGCCCGGATCGGTGGCGCGCGAGCGTTTGGACGCCGTGGCCGCGTC CCGTGATGGATTTGAACTAGCCGAACTTGACCTAGCTCAGCGTCATGAAGGCAATGTGCTGGGATCCTCTCAAGCCGGTT ATTCGTCCCCGCTACGCCTGTTGCGGGTGCTCGACCACGCTGAGATTGTGACGGCATCGAAAGACCTGGCCGAACGGTGG GTGGCCGAAGCCCCCGATGATCCGAGACTCCTTGACGTCGTGACCGCCACCGAGATGCTCGCTGAGGGTGACCTCATGGA ACAGGGTTGA
Upstream 100 bases:
>100_bases CGCATGAACGTGTGCACTTCGTGCCTCAAGGCTGGTCGAGTCAGCCGCTGAGCGCCGCGTTTGACGATGGAACCCGCCGT AAGGCGGGTTCTTTGTCGTT
Downstream 100 bases:
>100_bases GCCGCCCCCGTTAAAGAAGACTGAGCCGACCCTCCGCCACGTCGGCTATGAAGCATCATGAAGGCCCGAACCGCGAGAGC GATCCGGGCCTACTGAAATA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MGRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTGTETTDLSHLVIDTEVALVAD VVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFGKPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVM IDRNGKVVAGREEGKVMAAQVQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFTPTVGQDEVSRVIDADLSADR PMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEVLAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKA AGTRAALADIASGAAGIIVGTHSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWQRIREECDAGHQVFVVCPRINSDDADDVEGGRPPAAAVEELAPQ LATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGN LPGLCLLVTTAPPGSVARERLDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW VAEAPDDPRLLDVVTATEMLAEGDLMEQG
Sequences:
>Translated_749_residues MGRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTGTETTDLSHLVIDTEVALVAD VVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFGKPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVM IDRNGKVVAGREEGKVMAAQVQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFTPTVGQDEVSRVIDADLSADR PMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEVLAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKA AGTRAALADIASGAAGIIVGTHSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWQRIREECDAGHQVFVVCPRINSDDADDVEGGRPPAAAVEELAPQ LATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGN LPGLCLLVTTAPPGSVARERLDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW VAEAPDDPRLLDVVTATEMLAEGDLMEQG >Mature_748_residues GRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTGTETTDLSHLVIDTEVALVADV VGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFGKPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVMI DRNGKVVAGREEGKVMAAQVQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIHY PHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFTPTVGQDEVSRVIDADLSADRP MHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEVLAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKAA GTRAALADIASGAAGIIVGTHSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVFG DLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWQRIREECDAGHQVFVVCPRINSDDADDVEGGRPPAAAVEELAPQL ATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGNL PGLCLLVTTAPPGSVARERLDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERWV AEAPDDPRLLDVVTATEMLAEGDLMEQG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=730, Percent_Identity=33.8356164383562, Blast_Score=308, Evalue=7e-85, Organism=Escherichia coli, GI1787357, Length=406, Percent_Identity=34.4827586206897, Blast_Score=203, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 81402; Mature: 81270
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC TETTDLSHLVIDTEVALVADVVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFG CCCCCCEEEEEECHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECC KPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVMIDRNGKVVAGREEGKVMAAQ CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCEEEEECCCCEEECCCCCCEEHHH VQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH HHHCCCEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFT CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCC PTVGQDEVSRVIDADLSADRPMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEV CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHH LAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKAAGTRAALADIASGAAGIIVG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHCCHHHHHHHHHCCCCEEEEE THSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF CHHHHCCEEEEECCCEEEECCHHHCCCCHHCEEECCCCCCCCEEEEEECCCCCEEEEEEE GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWQRIREECDAGHQVFVVCPRINSDD CCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC ADDVEGGRPPAAAVEELAPQLATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLIS CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEE TTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGNLPGLCLLVTTAPPGSVARER EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH LDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAEAPDDPRLLDVVTATEMLAEGDLMEQG HHCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GRYGDDVNAVTRWRTRTQKELHRPLAEAVGAKTAKAFSALHVGTVGEALGHLPRRYLTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC TETTDLSHLVIDTEVALVADVVGVEVHTNKTVTGRERRPRQRLEVMLSDGKARLPVTFFG CCCCCCEEEEEECHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECC KPHIVSYWQRIFSAHTHGIFVGKVGEFRGNPQLVHPDFVMIDRNGKVVAGREEGKVMAAQ CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCEEEEECCCCEEECCCCCCEEHHH VQRHGLLGLYPQTSKLRTWEIASVESMLLESTPELEDTLPEWLRQEADLPSLWEAYHAIH HHHCCCEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC YPHSVAEADRGAERLIWEEAIATQVTMAVRRRSAERHDAPVCSRRDGGLLVAFEDRLPFT CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCC PTVGQDEVSRVIDADLSADRPMHRLLQGEVGSGKTFVALRAMLQVVDAGHQAVLLAPTEV CCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHH LAQQHYRTIINMLGDLASGEGLDAPEISTGVALLTGSMKAAGTRAALADIASGAAGIIVG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHCCHHHHHHHHHCCCCEEEEE THSLLSGRVIYNDIGLVVVDEQHRFGVEQRSVLTTGEGARPHELVLTATPIPRTVAMTVF CHHHHCCEEEEECCCEEEECCHHHCCCCHHCEEECCCCCCCCEEEEEECCCCCEEEEEEE GDLEVSSLRELPTGRADVQTTVVDLPAHGSWLTRAWQRIREECDAGHQVFVVCPRINSDD CCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC ADDVEGGRPPAAAVEELAPQLATGPLAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLIS CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEE TTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGRGNLPGLCLLVTTAPPGSVARER EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH LDAVAASRDGFELAELDLAQRHEGNVLGSSQAGYSSPLRLLRVLDHAEIVTASKDLAERW HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAEAPDDPRLLDVVTATEMLAEGDLMEQG HHCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]