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The map label for this gene is yraN [C]

Identifier: 50842911

GI number: 50842911

Start: 1550338

End: 1550760

Strand: Reverse

Name: yraN [C]

Synonym: PPA1431

Alternate gene names: 50842911

Gene position: 1550760-1550338 (Counterclockwise)

Preceding gene: 50842912

Following gene: 50842910

Centisome position: 60.57

GC content: 60.52

Gene sequence:

>423_bases
ATGATGACACCTAAGCCATTGTCGGCAGAGCTGACGACCCCGCGTGGAGCTGCGTTGCGTGGGCGTCGTGGTTGCAGACC
CGCGTTCGGTGCGTGGGGCGAGGATCTTGCCGCTCAGTATGTGGAGTCCCTGGGATGGACAATCATCGCGCGTAATTGGA
CGTGTGATGTGGGAGAGATTGACCTCATCGCGCGTGACGACCAGACCGTTGTCTTTATCGAGGTGAAGGCCAGGTCAGGC
ACTGGCTTCGGCGACCCGCTGGAATCTATTACGACGGCGAAGGTCCGTAAGCTTCACGAACTAGCACTGGCGTGGTTGGT
TAACCAGGACGACGGGGTCCACTCGGTGCGGATTGACGCCATCGGTGTCATGGTGCGCCCGGGCGCCGAGCCAACTGTCA
CACATGTGCGAGGTATCCGGTGA

Upstream 100 bases:

>100_bases
TTTGTGGATAACTTATGGTGCTTCTGATCCCGAAACATTGATCTGTGGATAACTGAATAATCAGGTGTTCTCCGACGATA
ACTGTTGTCGGAGGTGGTGA

Downstream 100 bases:

>100_bases
CCGGCGCAAGTGCGTGGTCGGTCGCGTTGGTAGGGATGGAAGGCTCCATGGTTGAGGTGGAAGCCGCAATTTCGTCCGGA
CTGCCGCGTACCGTGCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MMTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARDDQTVVFIEVKARSG
TGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRPGAEPTVTHVRGIR

Sequences:

>Translated_140_residues
MMTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARDDQTVVFIEVKARSG
TGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRPGAEPTVTHVRGIR
>Mature_140_residues
MMTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEIDLIARDDQTVVFIEVKARSG
TGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDAIGVMVRPGAEPTVTHVRGIR

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1431_PROAC (Q6A7T5)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_056138.1
- ProteinModelPortal:   Q6A7T5
- GeneID:   2931854
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1431
- HOGENOM:   HBG710155
- OMA:   VERNWRC
- ProtClustDB:   PRK12497
- BioCyc:   PACN267747:PPA1431-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 15248; Mature: 15248

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEI
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCE
DLIARDDQTVVFIEVKARSGTGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDA
EEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEE
IGVMVRPGAEPTVTHVRGIR
EEEEECCCCCCCHHCCCCCC
>Mature Secondary Structure
MMTPKPLSAELTTPRGAALRGRRGCRPAFGAWGEDLAAQYVESLGWTIIARNWTCDVGEI
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCE
DLIARDDQTVVFIEVKARSGTGFGDPLESITTAKVRKLHELALAWLVNQDDGVHSVRIDA
EEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEE
IGVMVRPGAEPTVTHVRGIR
EEEEECCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA