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The map label for this gene is smf [C]

Identifier: 50842909

GI number: 50842909

Start: 1547688

End: 1548821

Strand: Reverse

Name: smf [C]

Synonym: PPA1429

Alternate gene names: 50842909

Gene position: 1548821-1547688 (Counterclockwise)

Preceding gene: 50842910

Following gene: 50842905

Centisome position: 60.49

GC content: 61.29

Gene sequence:

>1134_bases
ATGACGTGGACGAGCGAGAGATTGGCGCGGGCCGCTCTGACAGCTGCTGCCGAGCCGGGGGTGATGGCGAAACGACTAGT
TGAGATGACCGCTGAAGAGCTGTGGCAGCACATGCTTACCGATTCTGGCGAACGATGGCACAAACGAGCTAAATCGCTCG
ACGTCGATCAACTCGTGGAGCGGTCGGAAAAGGCTGCGATGAGGTTCCTCATTCCAGGGGATGAGGAATGGCCCACGGGT
CTCGACAGCCTCGCGCGGGCGGGGAAATCTGGAATGGGTGGGGCACCTGTGGGGCTGTGGGTTACGGGGCCTGCTCACCT
CGCTGATATCTCTCAGCGGGCGGTGGCCATTGTGGGATGCCGGTCTGCTAGCAGCTATGGTCAAGACGTTGCCGTAGAAA
TGGCCTACCGCTTAGTACGGGGACACTGTGACGGAACGGGAAGCCATACTGTTATATCTGGCGGCGCGTTCGGTATCGAT
GTGGCGGCTCACCGTGGGGCATTGTCCGCTCGCGGAAACACGGTTAGCGTCCTCGCATGTGGACTTGACACCCTTTATCC
CCGTGGCAACAGCGCAGTGCTGGAACAGATCGCGGGAACAGGTGCCCTCGTTTCAGAGCTACCGCTGGGTCGTCACCCGA
CGCGACCTGGATTCCTCGCCCGAAACCGGCTCATCGCGGCACTGACGACTGGCACGGTCGTTGTGGAAGCTGGATGGCGG
TCGGGAGCGATCAATACCGCGTCGTGGGCCAACGCATTAGGAAATGCCGTCATGGCAGTCCCCGGGCCAGTGACCTCGAG
TCGGTCGACGGGGACGAACAAACTGATCCGTGATGGTGAGGCGATCTTGGTGCGCGATGCTGACGACGTCAGAGGGATTG
TTGGGGAGCTCGCCCCAGAACCGGAGAGACCAGCAGGGCGCAGCTTGCCGACTGACATCCTGGATGCCATTGAGCTGGCT
GTTCATGAGGCACTCCCCGCTCATGGATCGTGCGGGTTAGATGAGTTAGCGGTTTTGGCTGGAGTTCCCGTTGCTCAGTG
TTCGGCTGCGCTAAGCGTCCTCGAACAACTCGGCATGGCGGCTTGTTGCCTCGACGGCACCTGGTCGGTCACGCTGGCAA
GGGAGCGGAGGTGA

Upstream 100 bases:

>100_bases
TGCTGCGAATCGCGTGGACGGTGGCCGACCTCGAGGGCAAGGACGAGGTTGACAAAGCGTGTGTGGCGGAGGCCATGGGA
ATGCGACGAGGGAGATTGCG

Downstream 100 bases:

>100_bases
CACTCTCTAGATTGAGCAGGAAGCGCTTGAGGCGAGGACCACCGAGATAGCCTCCTAGCTGGCCGTTACTGCGTAGCACG
CGGTGGCACGGAATGAGGAT

Product: DNA processing / uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVERSEKAAMRFLIPGDEEWPTG
LDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGID
VAAHRGALSARGNTVSVLACGLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR
SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPEPERPAGRSLPTDILDAIELA
VHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTWSVTLARERR

Sequences:

>Translated_377_residues
MTWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVERSEKAAMRFLIPGDEEWPTG
LDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGID
VAAHRGALSARGNTVSVLACGLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR
SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPEPERPAGRSLPTDILDAIELA
VHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTWSVTLARERR
>Mature_376_residues
TWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVERSEKAAMRFLIPGDEEWPTGL
DSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGCRSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGIDV
AAHRGALSARGNTVSVLACGLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWRS
GAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPEPERPAGRSLPTDILDAIELAV
HEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMAACCLDGTWSVTLARERR

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=307, Percent_Identity=35.5048859934853, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39341; Mature: 39210

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
RSEKAAMRFLIPGDEEWPTGLDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGC
HHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEE
RSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLAC
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCCEEEEEEE
GLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR
CHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCEEEEEECCEEEEECCCC
SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPE
CCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHCCCC
PERPAGRSLPTDILDAIELAVHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHH
ACCLDGTWSVTLARERR
EEECCCCEEEEEECCCC
>Mature Secondary Structure 
TWTSERLARAALTAAAEPGVMAKRLVEMTAEELWQHMLTDSGERWHKRAKSLDVDQLVE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
RSEKAAMRFLIPGDEEWPTGLDSLARAGKSGMGGAPVGLWVTGPAHLADISQRAVAIVGC
HHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEE
RSASSYGQDVAVEMAYRLVRGHCDGTGSHTVISGGAFGIDVAAHRGALSARGNTVSVLAC
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCCEEEEEEE
GLDTLYPRGNSAVLEQIAGTGALVSELPLGRHPTRPGFLARNRLIAALTTGTVVVEAGWR
CHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCEEEEEECCEEEEECCCC
SGAINTASWANALGNAVMAVPGPVTSSRSTGTNKLIRDGEAILVRDADDVRGIVGELAPE
CCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHCCCC
PERPAGRSLPTDILDAIELAVHEALPAHGSCGLDELAVLAGVPVAQCSAALSVLEQLGMA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHH
ACCLDGTWSVTLARERR
EEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]