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The map label for this gene is bioY [H]

Identifier: 50842882

GI number: 50842882

Start: 1516922

End: 1517491

Strand: Reverse

Name: bioY [H]

Synonym: PPA1400

Alternate gene names: 50842882

Gene position: 1517491-1516922 (Counterclockwise)

Preceding gene: 50842883

Following gene: 50842881

Centisome position: 59.27

GC content: 58.77

Gene sequence:

>570_bases
ATGTCGTCACGCAATGGTTTCCAGGCCACCGACCTGGCTCTTATCGCGGTATTTGCAGCCCTCGTCGCTGTGCTAGCCGT
CATCCCGCCGATGTTCATGGTGGGGGCGGTCCCTTTTGCCCTTCAGATGGTTGCCGTCATGCTGGCGCCGATGGTGCTGG
GAAGTATCCGTGGCGGATGTGCGGTAAGCTTATATATCCTTGTCGGCGCGCTGGGACTGCCCGTCTTTAGCGGTGGGTCT
AGCGGGATTGGCGTCCTGGTGGGTCCCACTGGTGGGTATCTATGGGGATGGCTGATCGGCGCTTTCGTGGCGGGTGCAGT
AGCTACTTCCGTGCTGCGTCGACGTCCACGTAAGTCGATGCTTCCGGTATGGCTTTTTGTCGTCGCACTAGTGGACCTAG
TGTGCGTCTATCTTGGTGGCATCTTCGGGCTGATGGGCTTCGCGAAGTTGAGCTTGAATGCAGCCCTGGCAGCCAATCTT
GTCTTGTTCGGCCTCGATGTGGTGAAGGGGATTTTGGCTTGTCTCATCGCTACTGCGGTGCTGACTGCCTTTCCCCGGCT
CATGCCGTGA

Upstream 100 bases:

>100_bases
GCCGGGAGGCTCTTCGACAAGCTTCACTGAACGGTGTTCAATTGGTCCCAACGGCTGCCCATGTGGTCAGCCGCTCTATC
TCGTCATGGGAAGGAACCCG

Downstream 100 bases:

>100_bases
TCGAGTTCACAAATGTCAGCGTTGACGTTGACGAGTATGACGTTGAGGGCCGCCACCGTCGGGTGAAGATTCTTAGCACG
ATGAACCTCATTGTGTCGGA

Product: BioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGCAVSLYILVGALGLPVFSGGS
SGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSMLPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANL
VLFGLDVVKGILACLIATAVLTAFPRLMP

Sequences:

>Translated_189_residues
MSSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGCAVSLYILVGALGLPVFSGGS
SGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSMLPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANL
VLFGLDVVKGILACLIATAVLTAFPRLMP
>Mature_188_residues
SSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGCAVSLYILVGALGLPVFSGGSS
GIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSMLPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANLV
LFGLDVVKGILACLIATAVLTAFPRLMP

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19379; Mature: 19248

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AVSLYILVGALGLPVFSGGSSGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSM
HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANLVLFGLDVVKGILACLIATAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAFPRLMP
HHHHHHCCC
>Mature Secondary Structure 
SSRNGFQATDLALIAVFAALVAVLAVIPPMFMVGAVPFALQMVAVMLAPMVLGSIRGGC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AVSLYILVGALGLPVFSGGSSGIGVLVGPTGGYLWGWLIGAFVAGAVATSVLRRRPRKSM
HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LPVWLFVVALVDLVCVYLGGIFGLMGFAKLSLNAALAANLVLFGLDVVKGILACLIATAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAFPRLMP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]