Click here to switch to the map view.

The map label for this gene is 50842821

Identifier: 50842821

GI number: 50842821

Start: 1462890

End: 1463321

Strand: Direct

Name: 50842821

Synonym: PPA2385

Alternate gene names: NA

Gene position: 1462890-1463321 (Clockwise)

Preceding gene: 50842812

Following gene: 50842822

Centisome position: 57.14

GC content: 49.07

Gene sequence:

>432_bases
TTGCTCGCAACTGCAAGCAAGAAGCATCGTTGCACACCAGGGGGTCAACTTGGCGTCCTCAGTTCAAAATTGATTCAAAC
TAACAGTTCCATGTCGGGAAACAGCACCAGGAAGCTCGTGACATATCGTCTTTCATTGCGAGAAACATCTTACTTATGTA
CATTTCTAAGCTATATCGTCTACCCTTGTCAGACCCAGGACGATGGATGTCACATCCCCTTTCTAGTCAACCTAAGAGAG
GAGGAAATGCCGCGATATATGTTCCACCCTGTCATCACGAAGGCCACCACAATCTATCCCAGAACAGCCGGCACTTCACT
CACGATGCCCCGATGCTGGATTCCTATTGTCGCCCTCATTAGGGCAAGCGGTGCCAGTAGCAGAATATGTCACCTCAACA
ACTCGATCCACCCCTGCCCATTACATGGGTAA

Upstream 100 bases:

>100_bases
GTCGCTCCAGAGAAAGCTGCCGGCGCCATCAAGGCACCAACAACCAGCGGCGCTGCTAAGAACTTAACCTTCATTTGTGG
GTTCCTTTCATCGGGAACAA

Downstream 100 bases:

>100_bases
CATATCCATGGAGGTTCGATGTATATTCGAGGATACAGTCGTCCATCACGCCCGCCTACATACCCATTACATCAGCATAG
AAATATGCTCCAACAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLATASKKHRCTPGGQLGVLSSKLIQTNSSMSGNSTRKLVTYRLSLRETSYLCTFLSYIVYPCQTQDDGCHIPFLVNLRE
EEMPRYMFHPVITKATTIYPRTAGTSLTMPRCWIPIVALIRASGASSRICHLNNSIHPCPLHG

Sequences:

>Translated_143_residues
MLATASKKHRCTPGGQLGVLSSKLIQTNSSMSGNSTRKLVTYRLSLRETSYLCTFLSYIVYPCQTQDDGCHIPFLVNLRE
EEMPRYMFHPVITKATTIYPRTAGTSLTMPRCWIPIVALIRASGASSRICHLNNSIHPCPLHG
>Mature_143_residues
MLATASKKHRCTPGGQLGVLSSKLIQTNSSMSGNSTRKLVTYRLSLRETSYLCTFLSYIVYPCQTQDDGCHIPFLVNLRE
EEMPRYMFHPVITKATTIYPRTAGTSLTMPRCWIPIVALIRASGASSRICHLNNSIHPCPLHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15929; Mature: 15929

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATASKKHRCTPGGQLGVLSSKLIQTNSSMSGNSTRKLVTYRLSLRETSYLCTFLSYIV
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
YPCQTQDDGCHIPFLVNLREEEMPRYMFHPVITKATTIYPRTAGTSLTMPRCWIPIVALI
CCCCCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHH
RASGASSRICHLNNSIHPCPLHG
HCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLATASKKHRCTPGGQLGVLSSKLIQTNSSMSGNSTRKLVTYRLSLRETSYLCTFLSYIV
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHH
YPCQTQDDGCHIPFLVNLREEEMPRYMFHPVITKATTIYPRTAGTSLTMPRCWIPIVALI
CCCCCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHH
RASGASSRICHLNNSIHPCPLHG
HCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA