| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50842812
Identifier: 50842812
GI number: 50842812
Start: 1451445
End: 1452260
Strand: Direct
Name: 50842812
Synonym: PPA1332
Alternate gene names: NA
Gene position: 1451445-1452260 (Clockwise)
Preceding gene: 50842810
Following gene: 50842821
Centisome position: 56.69
GC content: 56.99
Gene sequence:
>816_bases TTGCAACTCCTCGGTAACCGTGAAAGCCGTTACCTGTTTCCCTGGTGCAGCAACGAGTTGATGAGCTCGCTCCGCACTGG TCGGGATGAAGACGATGGTGGATGTCGACAATTGAACCCTCCTTGGTCGGCGTGGCCCCAGATCCATGATCCACGCTACT CAAGTACGAGCAAGAACCATATATTGGTTCGCGACATCCCAGATGATGGAACGATTCGCTCACCAGAGTTGTCCACAGAT TTCCCGAACAACCCTTCCGCTTACGGTATCTCATGCGTTGTCCTTGGGTACATGACGACGACATCCTCGCCTATACCACT CAACTCGGCACTGGTAGACCATTCCGGGATCTTTTTGGAACTTGATCGGGATTGGTGGCCTGACGAACTATGTATCGTCT CATCGGCACCGACACTGAGCCGCAACGGAGATGACTCACAAGCTCGCTACGAGGCGGTAAGGCTCACCCGCGCAGCCCAC ATCATCATCGTGGAGACGATGGCTGGACGACGACCTATGAGCCAGCTCGTCAAGGCCAGTAGCACTCGTGCAGTTGCGAC GATGAGACGTTGGCCTCGCGGCCCGGGCTGGAGCCGTATGCTCCTCGTTGGTGAGCCACGCGTAAGTTACGACGACAACC GGGTCGACGGGGTGGGTCTGCTTGACCTCAGGGGCAGACGGTTACCGCTGGCCACCAGCCTGATACTTGAGGAACGTGCC TGGCGTCTCGACGCCGTGGAACTGGTCCTCAACCCCAAGGTGGCCACGTTATTAACGTTGAAGAAAATCACCTGTGAGAC CGTCGGGCTGGGATGA
Upstream 100 bases:
>100_bases CGAGTACCAAGCGTCGACCAGTGTGGGTCAATCCCCACACAGAACCGATGACCATGGCGGCATGCTCGGTTTCCTCCGGA TCGGTGACATCAAGGATGGA
Downstream 100 bases:
>100_bases TAACGACGGCGCCAGCCACGTGGAACTGGCGCCGTCGACCACTCACCGACGCTTCTTATTGCGGCGATTCTTTGGCTTCT TCGACGCCGCGGACCTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQLLGNRESRYLFPWCSNELMSSLRTGRDEDDGGCRQLNPPWSAWPQIHDPRYSSTSKNHILVRDIPDDGTIRSPELSTD FPNNPSAYGISCVVLGYMTTTSSPIPLNSALVDHSGIFLELDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAH IIIVETMAGRRPMSQLVKASSTRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERA WRLDAVELVLNPKVATLLTLKKITCETVGLG
Sequences:
>Translated_271_residues MQLLGNRESRYLFPWCSNELMSSLRTGRDEDDGGCRQLNPPWSAWPQIHDPRYSSTSKNHILVRDIPDDGTIRSPELSTD FPNNPSAYGISCVVLGYMTTTSSPIPLNSALVDHSGIFLELDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAH IIIVETMAGRRPMSQLVKASSTRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERA WRLDAVELVLNPKVATLLTLKKITCETVGLG >Mature_271_residues MQLLGNRESRYLFPWCSNELMSSLRTGRDEDDGGCRQLNPPWSAWPQIHDPRYSSTSKNHILVRDIPDDGTIRSPELSTD FPNNPSAYGISCVVLGYMTTTSSPIPLNSALVDHSGIFLELDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAH IIIVETMAGRRPMSQLVKASSTRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERA WRLDAVELVLNPKVATLLTLKKITCETVGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30299; Mature: 30299
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLGNRESRYLFPWCSNELMSSLRTGRDEDDGGCRQLNPPWSAWPQIHDPRYSSTSKNH CCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ILVRDIPDDGTIRSPELSTDFPNNPSAYGISCVVLGYMTTTSSPIPLNSALVDHSGIFLE EEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHEECCCCEEEE LDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAHIIIVETMAGRRPMSQLVKAS ECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHC STRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERA CHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH WRLDAVELVLNPKVATLLTLKKITCETVGLG CCCEEEEEEECCCHHHHEEHHHHHEEECCCC >Mature Secondary Structure MQLLGNRESRYLFPWCSNELMSSLRTGRDEDDGGCRQLNPPWSAWPQIHDPRYSSTSKNH CCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ILVRDIPDDGTIRSPELSTDFPNNPSAYGISCVVLGYMTTTSSPIPLNSALVDHSGIFLE EEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHEECCCCEEEE LDRDWWPDELCIVSSAPTLSRNGDDSQARYEAVRLTRAAHIIIVETMAGRRPMSQLVKAS ECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHC STRAVATMRRWPRGPGWSRMLLVGEPRVSYDDNRVDGVGLLDLRGRRLPLATSLILEERA CHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH WRLDAVELVLNPKVATLLTLKKITCETVGLG CCCEEEEEEECCCHHHHEEHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA