Click here to switch to the map view.

The map label for this gene is 50842765

Identifier: 50842765

GI number: 50842765

Start: 1392027

End: 1393247

Strand: Reverse

Name: 50842765

Synonym: PPA1284

Alternate gene names: NA

Gene position: 1393247-1392027 (Counterclockwise)

Preceding gene: 50842766

Following gene: 50842764

Centisome position: 54.42

GC content: 47.99

Gene sequence:

>1221_bases
GTGAAGACAATAGGGACACGAAGTAAACCGTCAAAATCGCGGCTTCCTGGGCGTGTATTCAACCTCATTATGGCAGACCA
AGTTCTCAGCCAATCATCTTACTTTGCGTTGCTACCGGTCCTCCCTCTATTGCTTACATTGAAATTTGGAAGTACGCAGG
AACGGCTCATCGCGGGGTCGGTAAGCGTGCTTACACTGATGACTCGTGGTGGTGCTCTATTTCTTGCTTCGCCACTTCAC
CGTTTATCAGTGCGAAGTTGCGTAAGAATTGCTCTTACTCTGATCTCGGTTTCTTACGCTGTTGTGGCGCTTACGGCAAA
CCCCTATGCGATAATTGCTGCTCTGGGCGCTGCGGGCCTAGGGTTCAGTGTTAATGGTACTGGTGTGCGAAGCTTTATAG
CGCTAGCAACTCCTGATAGAGCTTCCCAGAACCGCGGTTTCGCTGTCATTCAAGTTGTCGCGAATTGCACTGCGGCGGTA
GGTCCTATTATCGGTAATATGATACTTGATAGAAATATTTATGAGCAGTTTCTATTAGGAGTCAGTGTAGCGCTCTTTAT
CGCTGCGATATTAGCGCCAATGGCTGCCCCGAAAGGCGTGATGATGAGCGAAGGTTCCCTGAGGCCGCCGATGGGGATCA
AAATTTTTCGTGAATTATTCAGGACGGCTGACGCGAGAAAAATAACGATCGTAGCACTAATAGGCAGTATCCTGATAGGG
CAATTCTTTTCAAGTTTTTCCCTAGTCTTTTCTGCAATAGCGACAAGTTCTATGATGAGGTCGCTGTTCTATACAACTAA
TGGAGTGCTTGTCGTGTTGATTCAAATTCCGATATCTTTGCTTGTGGAACGCCAGCTAAAAATTGGAGTGAAAGTCCAGA
AGATCATGATGTCAGGAGTGTGTACTCTTGGCATATCGATGCTATTCTTTAATGCTTCAAGGGGATTGCTTGGCGTAGTC
CTTGTATTCTGTGGGGTGTTTATCTTTTCGTTGGGGGAGACGGTATTCACGCCAATTCTTAATGTTGCTTTTGCTAACCT
CACCGAGGGCCGACCTGTCGTGGAATCGATGAACATGAGGCAGCTCACCTCTGCTGTAGGTGAGACGGTCGGTGTTTGGA
TAGGACTGTCCGTCTACAGCCAGTTGGAGCATGCCCATCTTGGCCTCATGTACTGGATTGCTTTGACAGCCCTGGCTGCT
CTGTCGCTGCGTTGCAAATGA

Upstream 100 bases:

>100_bases
AGCATTAAACTCGAAGATTCGTGCGGGAAGATAAAGTTTGTGATGAAGCGATTAAAGAAGCTGTTAGCGTCGTTGATTGG
ACTCAAGTCTAGGGGTGCCA

Downstream 100 bases:

>100_bases
TGATGGACAGTCCGTTCGATGGTTCCCAGACAGATCCTGTACCGGGCGGCTTTCTGGAAATTATGCTTGGAAGAAGCTAC
CGCGAGTCCTTTTACCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKTIGTRSKPSKSRLPGRVFNLIMADQVLSQSSYFALLPVLPLLLTLKFGSTQERLIAGSVSVLTLMTRGGALFLASPLH
RLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGLGFSVNGTGVRSFIALATPDRASQNRGFAVIQVVANCTAAV
GPIIGNMILDRNIYEQFLLGVSVALFIAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIG
QFFSSFSLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGVCTLGISMLFFNASRGLLGVV
LVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMRQLTSAVGETVGVWIGLSVYSQLEHAHLGLMYWIALTALAA
LSLRCK

Sequences:

>Translated_406_residues
MKTIGTRSKPSKSRLPGRVFNLIMADQVLSQSSYFALLPVLPLLLTLKFGSTQERLIAGSVSVLTLMTRGGALFLASPLH
RLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGLGFSVNGTGVRSFIALATPDRASQNRGFAVIQVVANCTAAV
GPIIGNMILDRNIYEQFLLGVSVALFIAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIG
QFFSSFSLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGVCTLGISMLFFNASRGLLGVV
LVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMRQLTSAVGETVGVWIGLSVYSQLEHAHLGLMYWIALTALAA
LSLRCK
>Mature_406_residues
MKTIGTRSKPSKSRLPGRVFNLIMADQVLSQSSYFALLPVLPLLLTLKFGSTQERLIAGSVSVLTLMTRGGALFLASPLH
RLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGLGFSVNGTGVRSFIALATPDRASQNRGFAVIQVVANCTAAV
GPIIGNMILDRNIYEQFLLGVSVALFIAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIG
QFFSSFSLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGVCTLGISMLFFNASRGLLGVV
LVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMRQLTSAVGETVGVWIGLSVYSQLEHAHLGLMYWIALTALAA
LSLRCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43374; Mature: 43374

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGTRSKPSKSRLPGRVFNLIMADQVLSQSSYFALLPVLPLLLTLKFGSTQERLIAGS
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSVLTLMTRGGALFLASPLHRLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGL
HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCC
GFSVNGTGVRSFIALATPDRASQNRGFAVIQVVANCTAAVGPIIGNMILDRNIYEQFLLG
CCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVALFIAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIG
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QFFSSFSLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHH
CTLGISMLFFNASRGLLGVVLVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHH
QLTSAVGETVGVWIGLSVYSQLEHAHLGLMYWIALTALAALSLRCK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTIGTRSKPSKSRLPGRVFNLIMADQVLSQSSYFALLPVLPLLLTLKFGSTQERLIAGS
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSVLTLMTRGGALFLASPLHRLSVRSCVRIALTLISVSYAVVALTANPYAIIAALGAAGL
HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCC
GFSVNGTGVRSFIALATPDRASQNRGFAVIQVVANCTAAVGPIIGNMILDRNIYEQFLLG
CCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVALFIAAILAPMAAPKGVMMSEGSLRPPMGIKIFRELFRTADARKITIVALIGSILIG
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QFFSSFSLVFSAIATSSMMRSLFYTTNGVLVVLIQIPISLLVERQLKIGVKVQKIMMSGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHH
CTLGISMLFFNASRGLLGVVLVFCGVFIFSLGETVFTPILNVAFANLTEGRPVVESMNMR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHH
QLTSAVGETVGVWIGLSVYSQLEHAHLGLMYWIALTALAALSLRCK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA