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The map label for this gene is 50842766

Identifier: 50842766

GI number: 50842766

Start: 1393836

End: 1395143

Strand: Reverse

Name: 50842766

Synonym: PPA1285

Alternate gene names: NA

Gene position: 1395143-1393836 (Counterclockwise)

Preceding gene: 50842767

Following gene: 50842765

Centisome position: 54.49

GC content: 45.03

Gene sequence:

>1308_bases
ATGTTTTCTCGTGACAGCGTAGTGGCTGAAAGAAACTGGGCAGTGTTGGTAGGTGTCACCACATCTGGATCTCATGCCTC
AACGCATTGGTTTAAAAGCTTCTATGAAGCGTGCCAGAAGCGCCACATAATGATATGTGGCGTAGATTTCGAGGAAGAAC
TAAAGAACAAAATTCCGCCGATTTCTGTTGATTGTTTAATTAGAATATCCGGACCCTACAGGAGAAGCTTAGATGCTGAT
GAGATCGCTAAAATAGCGACAGAAATTGAAACCCGATGCCCTGGAAGGGTAGCTCTTTCAACGGCACTGCGCGAAAATTA
TCAGTTGCAGAATAGTCTTTTAGCTGAAGCTATTGGTGTTGCTAGAAATACTGCTGATTGTATTGAACGTATCCAAGATA
AACCAGCGTGCCGCGATGCGCTTCGAAAAGCTGGTATCTATCAGCCACAAAGCTTGCGTATTGTTGGAGTGACTTCTGAT
GGGTGCCTACAATTTAGTGATGCATCAGGTGCTGTCGTTGAAAAACCAACCGATAGCCCAAGAGGCTGGATTGTTAAGCC
ATCCATAGGAATGGGCAGTGTTGGCGTTAGACACATCTTAAATGTTGAAGATACTTCTGGACTTGATGCTGTCGTTCTCG
AGGGGAATTACTGCTTAGAAGAGTTTATCACGGGTATTGAGTACTCAGTTGAGGGTATTGCTATAGATGGACGGGTATGC
ATCTACACAACCACAGCAAAAACAACCAACGAAGATTTCGTTGAAATTGGTCATATCCAGCCAGCTGATCTGAACAGTAT
ATCCAGCAAACTTGAATTTGAAGAACAGCTTCAAAGCTGTGTAAATGCGCTTGGAATTGAGTGTGGAAATCTGCATGTTG
AATTTTGGGTCACACCTGAGAAAAAAATTGTATGGGGAGAATTTCACGTGCGTCAAGGCGGAGATTTTATTGCGCCGGAT
CTTGTGTCAGCTGTGCGACCAGGGATCGACTACTATGGAAATCTGATTGATTCTTTGTGTGGACTTCCTCTCCATCCTTT
GCCTGAGATAACCCAGTGTGCTGCTTCAAAGTTTATCGAAGCCTCGCCTGGAGTGGTATCAGAGGTTTCGCTCTATGACA
GTGTCCCTGAAGAAATCGATTTGTATTGGGAATGCTTCCCAGGAGAAGTAGCACATGCAGTAAATGGTTCGCATGCAAGG
GTAGCTGCTATTGTTGCCCGTGGCAATGACGAGCATACAGTGACTCAGTTATTGGATCGCGCTGCTAATGCTTGCGTAGT
GCGTGTCGCTCCTGTAAGCAGAGATTAG

Upstream 100 bases:

>100_bases
GCCATCCAATGGCGTGAAGCTACGAGTGAGACGTACAGATTGATCGAAGTGACCGGAGGGCATTATGCACATGAAGGTTT
TAGAAGAAAGGAATGGTTAA

Downstream 100 bases:

>100_bases
TTGCGTGGCAGTAGATTTTACGGCGAGCAGTGAAACACACACCATGACTATATTATGCGGCACGCTACGATAACCTTGTT
CGCAGCTTTAAACATCGTCG

Product: putative biotin carboxylase

Products: NA

Alternate protein names: L-Lactate Dehydrogenase; Carbamoyl-Phosphate Synthase Large Chain; Carboxylase; CarB Family Protein; Carbamoyl-Phosphate Synthase Large Subunit; Biotin Carboxylase

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MFSRDSVVAERNWAVLVGVTTSGSHASTHWFKSFYEACQKRHIMICGVDFEEELKNKIPPISVDCLIRISGPYRRSLDAD
EIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGVARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSD
GCLQFSDASGAVVEKPTDSPRGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC
IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPEKKIVWGEFHVRQGGDFIAPD
LVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIEASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHAR
VAAIVARGNDEHTVTQLLDRAANACVVRVAPVSRD

Sequences:

>Translated_435_residues
MFSRDSVVAERNWAVLVGVTTSGSHASTHWFKSFYEACQKRHIMICGVDFEEELKNKIPPISVDCLIRISGPYRRSLDAD
EIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGVARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSD
GCLQFSDASGAVVEKPTDSPRGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC
IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPEKKIVWGEFHVRQGGDFIAPD
LVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIEASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHAR
VAAIVARGNDEHTVTQLLDRAANACVVRVAPVSRD
>Mature_435_residues
MFSRDSVVAERNWAVLVGVTTSGSHASTHWFKSFYEACQKRHIMICGVDFEEELKNKIPPISVDCLIRISGPYRRSLDAD
EIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGVARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSD
GCLQFSDASGAVVEKPTDSPRGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC
IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPEKKIVWGEFHVRQGGDFIAPD
LVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIEASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHAR
VAAIVARGNDEHTVTQLLDRAANACVVRVAPVSRD

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47493; Mature: 47493

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRDSVVAERNWAVLVGVTTSGSHASTHWFKSFYEACQKRHIMICGVDFEEELKNKIPP
CCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCC
ISVDCLIRISGPYRRSLDADEIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSDGCLQFSDASGAVVEKPTDSP
CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCEEECCCCCC
RGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC
CCEEEECCCCCCCCCHHHEECCCCCCCCCEEEEECCHHHHHHHCCCEEEEEEEEECCEEE
IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPE
EEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCC
KKIVWGEFHVRQGGDFIAPDLVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIE
CEEEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
ASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHARVAAIVARGNDEHTVTQLLDR
CCCCCHHHHHHHHCCCCHHEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHH
AANACVVRVAPVSRD
CCCEEEEEEECCCCC
>Mature Secondary Structure
MFSRDSVVAERNWAVLVGVTTSGSHASTHWFKSFYEACQKRHIMICGVDFEEELKNKIPP
CCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCC
ISVDCLIRISGPYRRSLDADEIAKIATEIETRCPGRVALSTALRENYQLQNSLLAEAIGV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARNTADCIERIQDKPACRDALRKAGIYQPQSLRIVGVTSDGCLQFSDASGAVVEKPTDSP
CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCEEECCCCCC
RGWIVKPSIGMGSVGVRHILNVEDTSGLDAVVLEGNYCLEEFITGIEYSVEGIAIDGRVC
CCEEEECCCCCCCCCHHHEECCCCCCCCCEEEEECCHHHHHHHCCCEEEEEEEEECCEEE
IYTTTAKTTNEDFVEIGHIQPADLNSISSKLEFEEQLQSCVNALGIECGNLHVEFWVTPE
EEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCC
KKIVWGEFHVRQGGDFIAPDLVSAVRPGIDYYGNLIDSLCGLPLHPLPEITQCAASKFIE
CEEEEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
ASPGVVSEVSLYDSVPEEIDLYWECFPGEVAHAVNGSHARVAAIVARGNDEHTVTQLLDR
CCCCCHHHHHHHHCCCCHHEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHH
AANACVVRVAPVSRD
CCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA