| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842744
Identifier: 50842744
GI number: 50842744
Start: 1373028
End: 1373294
Strand: Reverse
Name: 50842744
Synonym: PPA2382
Alternate gene names: NA
Gene position: 1373294-1373028 (Counterclockwise)
Preceding gene: 50842745
Following gene: 50842743
Centisome position: 53.64
GC content: 55.43
Gene sequence:
>267_bases ATGACGATGACCCAGTCCGCTGGTAACAAGGAATCCTGTTATTGGGTCATTGACCACCTCCAGGAATTCCTCCATGGAGA AATGAGTGAGCACGATGCTGATGCCTTCCGCCGTCACATCGCGGCGTGCGAAAATTGCATGGATGAAGCCGACATGGAAG CTGCCGTCTCTCGAGCTCTCAAACGGTGCAACCGCACCGTGGCAGCTCCTATGCAGTTGCGGAGTCGTCTCGTGCAAATG CACGTCACGTATCGCTGGGAAGCCTGA
Upstream 100 bases:
>100_bases TCGACGTCGCAGGTGCTCGAGGGATCGGTCCTCGCGCCGGGCAAGTAGATGAAGAGGATCTTGGTCGTTCTGCGATGGCC CGTACAGCAGGAAGGGAGGG
Downstream 100 bases:
>100_bases GCTCGGTGTGAGTCCCTGAGCATGGGGGAGTCAGCACGACGAGTAAGGCCCCGTCCCTAGGGGACGGGGCCTTACTATCC CAAACCTCAAGCGTTGGGAC
Product: putative anti-sigma factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTMTQSAGNKESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRALKRCNRTVAAPMQLRSRLVQM HVTYRWEA
Sequences:
>Translated_88_residues MTMTQSAGNKESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRALKRCNRTVAAPMQLRSRLVQM HVTYRWEA >Mature_87_residues TMTQSAGNKESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRALKRCNRTVAAPMQLRSRLVQMH VTYRWEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10189; Mature: 10057
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTQSAGNKESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRAL CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRCNRTVAAPMQLRSRLVQMHVTYRWEA HHHCCHHCCHHHHHHHHHHHHHHHEECC >Mature Secondary Structure TMTQSAGNKESCYWVIDHLQEFLHGEMSEHDADAFRRHIAACENCMDEADMEAAVSRAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRCNRTVAAPMQLRSRLVQMHVTYRWEA HHHCCHHCCHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA