| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yhjX [C]
Identifier: 50842567
GI number: 50842567
Start: 1181756
End: 1182907
Strand: Direct
Name: yhjX [C]
Synonym: PPA1089
Alternate gene names: 50842567
Gene position: 1181756-1182907 (Clockwise)
Preceding gene: 50842566
Following gene: 50842569
Centisome position: 46.16
GC content: 57.64
Gene sequence:
>1152_bases ATGTTCACGTTGCCTCCCCTGTTTACCGCATGGTGGGGGGCCGTCACGAAGGCCTCGGACGCATCATTGGGTTGGGTGAC GACGTGCGCGGTCCTTGCGTCGGGGATGCTGACTTATGTCGCTGGGATCGTCCGGCAGCAGGTGGGTACCCGCTGGATGT ATGTTGTGGCGACGGTTCTTATGCTTGTGTCTCTAGCAGTCGTGCTGGTTAACCCACGGTCGCTACCCATCGCTTATGTT TGGGCGCTGTTGTCCGGGGCATCCTCGGCTTTCACCTATTCTCCCTCATTGACCGCAGTCCAGGAATGGTTCCCGCGACG GTTGGGACTGGTCACCGGATTGGTCAACGCTAGTTTTGCGCTTCCGGCTGCTGCGGCGGCCCCTATCGTGGCGGGCATGC TGAGAAATTGGGGATTCACAGCCACGGTTTTGACGCTCATGGTTGCCGTCGCCCTGACACAGATGATGGTGATTTTTCTT TCCACCCCATATTGGCTTGAGAAAAAACATGCGGAAGAGTTGGCAGTCGCGCGGAGAGAGATTTCTGGGCCGGCGGTGAC AACTGCTCAAGCTGTGCGGACTCCCGCATTCTGGCAGGTGTGGGCGATGTGGTTCGCTGGCGGTGGGGCTGCCATTACGA TGATGACTTTTGCTGCCACTTACTCCGCACATCTTAACGATATTGGGGTGCAAGTAAGTGCGGTGGCTGCCGTCACAGCT TTCGTTTCCGGAAATGGACTGATACGGGTGGTTAACGCGATGCTGCTCGACCATATTGGCCCGACGGTGATCGGGGGTGT TACATCCGTGACCCTCGCCTTTGGCTACATGCTGTTGGGGTTCGTCGCCAGTGGCTGGGCACTCATCGTCGTGGCTTTTC TGGCTGGCGTCGCTTTGGGGACTATCTTCACGATCTCCCCTGTGCTATTGACGCCCCTTTTCGGTATCAAGCACTTTGGT CCGATCTTCGGCCTGGCTTTCAGCGCCTACGGCATTTTTGGGGCTTTTGCCGGACCGATGTTCAGTTCTTATCTGGCTCA ACGGCTGGGATATGGCTTGGTATTCATCTACCTCGCGCTGCTGATGTTCTGGGCGTTCCTTTCCGTGCTCGCGGTCGGCC GCTCCCAGCAGCGAATGGCAACTTGGGCTTAG
Upstream 100 bases:
>100_bases ACCCAGAAAGGGAATTGCGACTTTGCAAGGGTCTTCGTCACGGAGAGCCAATTGCGCCTTAGCAGCCAGTCTTCTGGGTA CGTTGTTTCCCGGAGTCGTC
Downstream 100 bases:
>100_bases CGCAAGGTGGCCCTTCCGTTGTCAACCAGTCCCGACGGGGACCACGTTCATTCGGAAGGGCCACTGTTGGGCCATAGCTG TCAGGCCTGCCCGATCTCGC
Product: putative oxalate/formate-specific permease
Products: NA
Alternate protein names: Oxalate/Formate-Specific Permease
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVLMLVSLAVVLVNPRSLPIAYV WALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFALPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFL STPYWLEKKHAEELAVARREISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALGTIFTISPVLLTPLFGIKHFG PIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLALLMFWAFLSVLAVGRSQQRMATWA
Sequences:
>Translated_383_residues MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVLMLVSLAVVLVNPRSLPIAYV WALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFALPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFL STPYWLEKKHAEELAVARREISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALGTIFTISPVLLTPLFGIKHFG PIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLALLMFWAFLSVLAVGRSQQRMATWA >Mature_383_residues MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVLMLVSLAVVLVNPRSLPIAYV WALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFALPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFL STPYWLEKKHAEELAVARREISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALGTIFTISPVLLTPLFGIKHFG PIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLALLMFWAFLSVLAVGRSQQRMATWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40723; Mature: 40723
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVL CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH MLVSLAVVLVNPRSLPIAYVWALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFA HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFLSTPYWLEKKHAEELAVARRE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALG HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFTISPVLLTPLFGIKHFGPIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LMFWAFLSVLAVGRSQQRMATWA HHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MFTLPPLFTAWWGAVTKASDASLGWVTTCAVLASGMLTYVAGIVRQQVGTRWMYVVATVL CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH MLVSLAVVLVNPRSLPIAYVWALLSGASSAFTYSPSLTAVQEWFPRRLGLVTGLVNASFA HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LPAAAAAPIVAGMLRNWGFTATVLTLMVAVALTQMMVIFLSTPYWLEKKHAEELAVARRE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ISGPAVTTAQAVRTPAFWQVWAMWFAGGGAAITMMTFAATYSAHLNDIGVQVSAVAAVTA CCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FVSGNGLIRVVNAMLLDHIGPTVIGGVTSVTLAFGYMLLGFVASGWALIVVAFLAGVALG HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFTISPVLLTPLFGIKHFGPIFGLAFSAYGIFGAFAGPMFSSYLAQRLGYGLVFIYLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LMFWAFLSVLAVGRSQQRMATWA HHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA