| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842546
Identifier: 50842546
GI number: 50842546
Start: 1159833
End: 1160402
Strand: Reverse
Name: 50842546
Synonym: PPA1064
Alternate gene names: NA
Gene position: 1160402-1159833 (Counterclockwise)
Preceding gene: 50842547
Following gene: 50842545
Centisome position: 45.32
GC content: 59.47
Gene sequence:
>570_bases ATGTATCCCGTGGTTTTTGACGAGTTGCGTTCCCGGATCCTCGGCTATTCGTGGTCTGACAAGCTCGAGGTCCATGAGAT CCCCGCTCCTACCCGCATCTCGCCGTTCTCGGTAGCAATTGAAGGTTCGGTCGCGATCAGGGAAGACGAACTCGGCAGCG GGCGTCTCATCCTGTTGCACGATCCTTCCGGTTCTGAAGCCTGGCAAGGCACCAGCCGTTTCGTCGCCATGATCCGAGCC GATGTTGATCCGTCAATGGCTTCTGACCCACTAGTGGGCCGCGTCGCGTGGTCATGGCTTACGGATTCTTTGGAATCTCA CCACGCCGTCTACCATGCCGAAGCCGGTACCGTCACCTCAGTTGTGAGCCGGCCCTTCGGACAGCTCGCTGCAGACCCTG AGTCCAACCACATCGAGCTGCGTGCCTCGTGGACACCAACTTTCTCAACCGCCGAAGACGTCGATTCCCATTTGGGATCA TGGAGTGACCTCTGCCTGCTCTCCTGCGGGGTCTCTCCCATTCCCGACGACATTGCCGCCATCTCTCCCCGACGGGCCGA ATTCGCGTGA
Upstream 100 bases:
>100_bases CCGAAACCCTCAACCTCAACCGCATAGATCCGCAGCACGCGGCGCGTCGAGAGGGCGTCGCAGGTGTCAGCCCCCATAGC CTGAAAGGGTGATTCGGCAG
Downstream 100 bases:
>100_bases GCGACCTCCCTATCCTTGCTGAACCTCGCGAGGGAGTGCCGCCGGTCGTCAACACTCCCGACAGTCTCACGCACACCTGT CGGGCCCTCAGTAACGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS WSDLCLLSCGVSPIPDDIAAISPRRAEFA
Sequences:
>Translated_189_residues MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS WSDLCLLSCGVSPIPDDIAAISPRRAEFA >Mature_189_residues MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS WSDLCLLSCGVSPIPDDIAAISPRRAEFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20586; Mature: 20586
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCEEEEE DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS CCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA HHHCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH ISPRRAEFA CCCCCCCCC >Mature Secondary Structure MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCEEEEE DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS CCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA HHHCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH ISPRRAEFA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA