Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842546

Identifier: 50842546

GI number: 50842546

Start: 1159833

End: 1160402

Strand: Reverse

Name: 50842546

Synonym: PPA1064

Alternate gene names: NA

Gene position: 1160402-1159833 (Counterclockwise)

Preceding gene: 50842547

Following gene: 50842545

Centisome position: 45.32

GC content: 59.47

Gene sequence:

>570_bases
ATGTATCCCGTGGTTTTTGACGAGTTGCGTTCCCGGATCCTCGGCTATTCGTGGTCTGACAAGCTCGAGGTCCATGAGAT
CCCCGCTCCTACCCGCATCTCGCCGTTCTCGGTAGCAATTGAAGGTTCGGTCGCGATCAGGGAAGACGAACTCGGCAGCG
GGCGTCTCATCCTGTTGCACGATCCTTCCGGTTCTGAAGCCTGGCAAGGCACCAGCCGTTTCGTCGCCATGATCCGAGCC
GATGTTGATCCGTCAATGGCTTCTGACCCACTAGTGGGCCGCGTCGCGTGGTCATGGCTTACGGATTCTTTGGAATCTCA
CCACGCCGTCTACCATGCCGAAGCCGGTACCGTCACCTCAGTTGTGAGCCGGCCCTTCGGACAGCTCGCTGCAGACCCTG
AGTCCAACCACATCGAGCTGCGTGCCTCGTGGACACCAACTTTCTCAACCGCCGAAGACGTCGATTCCCATTTGGGATCA
TGGAGTGACCTCTGCCTGCTCTCCTGCGGGGTCTCTCCCATTCCCGACGACATTGCCGCCATCTCTCCCCGACGGGCCGA
ATTCGCGTGA

Upstream 100 bases:

>100_bases
CCGAAACCCTCAACCTCAACCGCATAGATCCGCAGCACGCGGCGCGTCGAGAGGGCGTCGCAGGTGTCAGCCCCCATAGC
CTGAAAGGGTGATTCGGCAG

Downstream 100 bases:

>100_bases
GCGACCTCCCTATCCTTGCTGAACCTCGCGAGGGAGTGCCGCCGGTCGTCAACACTCCCGACAGTCTCACGCACACCTGT
CGGGCCCTCAGTAACGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA
DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS
WSDLCLLSCGVSPIPDDIAAISPRRAEFA

Sequences:

>Translated_189_residues
MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA
DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS
WSDLCLLSCGVSPIPDDIAAISPRRAEFA
>Mature_189_residues
MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLHDPSGSEAWQGTSRFVAMIRA
DVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTSVVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGS
WSDLCLLSCGVSPIPDDIAAISPRRAEFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20586; Mature: 20586

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH
CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCEEEEE
DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS
CCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA
HHHCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
ISPRRAEFA
CCCCCCCCC
>Mature Secondary Structure
MYPVVFDELRSRILGYSWSDKLEVHEIPAPTRISPFSVAIEGSVAIREDELGSGRLILLH
CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCEEEEE
DPSGSEAWQGTSRFVAMIRADVDPSMASDPLVGRVAWSWLTDSLESHHAVYHAEAGTVTS
CCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
VVSRPFGQLAADPESNHIELRASWTPTFSTAEDVDSHLGSWSDLCLLSCGVSPIPDDIAA
HHHCCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
ISPRRAEFA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA