| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842535
Identifier: 50842535
GI number: 50842535
Start: 1146299
End: 1146829
Strand: Direct
Name: 50842535
Synonym: PPA1053
Alternate gene names: NA
Gene position: 1146299-1146829 (Clockwise)
Preceding gene: 50842533
Following gene: 50842536
Centisome position: 44.77
GC content: 58.38
Gene sequence:
>531_bases ATGGTGAATTTCCCTTCAGGATCAGTGGTCTACTCCGAGAGGCTCTGGGCGCCGTTGTCGTGGTGGCTTATTGGGGCTGC GGTGGCGCTTTCGCTCATCGTCGCAATTGGAGCATGGACGAGCCTGGCTACCGGGGGCATCGTGGCTGTCATCGTTGTGG TGGTAGTCGTCGCGGCTTTCATCAAGGCTGGAAGCGTGCGGATTGTGGTCACTGAAGAAGGATTTGGCGTTGGGCGTTCC TGGATTGAGTGGCATTGGGTCGATCGGGTGCGGGGTATGGATGCCCAGACCATGAACTCGGTGATGCGGTCCAGCCATCA GGTGGGGTCGTTTTTGGTGACTCGGCCGTGGATTAGATCTGGGCTCGTTTTGAGGCTTGCCGACCCTGCTGATCCTCATC AGGCGTGGATCGTGAGTACACGTCGTCCTGGCAAGCTGGCGGCCATTGTCGGTGAGTACATTGTGGTGCCGGGATCCCCG TCCAGCTCCGAGAACTTGTCTGAGAACTCTATGGAGGACAACCATGGCTGA
Upstream 100 bases:
>100_bases GTGGTGACCGCGCCAAGGGCGCCGGCGTAAACCTTCCATAGGATCTTTTCTGGGATCATGTTGTCATCATATGGCGTGAC GGTCCGTCGATTAGGCTGTG
Downstream 100 bases:
>100_bases TGTCGTTGTGCCCACTGTGGCGGTTCCCGAGGCGATGCCTCGATATGCCATGCCTGGCGATGCCGGGGCCGACCTCACCT GCCGCCACGATGTCGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAFIKAGSVRIVVTEEGFGVGRS WIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRSGLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSP SSSENLSENSMEDNHG
Sequences:
>Translated_176_residues MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAFIKAGSVRIVVTEEGFGVGRS WIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRSGLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSP SSSENLSENSMEDNHG >Mature_176_residues MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAFIKAGSVRIVVTEEGFGVGRS WIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRSGLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSP SSSENLSENSMEDNHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18990; Mature: 18990
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAF CCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IKAGSVRIVVTEEGFGVGRSWIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRS HCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECHHHHC GLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSPSSSENLSENSMEDNHG CCEEEECCCCCCCCEEEEECCCCCHHHEEECCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVNFPSGSVVYSERLWAPLSWWLIGAAVALSLIVAIGAWTSLATGGIVAVIVVVVVVAAF CCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IKAGSVRIVVTEEGFGVGRSWIEWHWVDRVRGMDAQTMNSVMRSSHQVGSFLVTRPWIRS HCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECHHHHC GLVLRLADPADPHQAWIVSTRRPGKLAAIVGEYIVVPGSPSSSENLSENSMEDNHG CCEEEECCCCCCCCEEEEECCCCCHHHEEECCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA