Click here to switch to the map view.

The map label for this gene is 50842516

Identifier: 50842516

GI number: 50842516

Start: 1124235

End: 1126808

Strand: Reverse

Name: 50842516

Synonym: PPA1033

Alternate gene names: NA

Gene position: 1126808-1124235 (Counterclockwise)

Preceding gene: 50842518

Following gene: 50842514

Centisome position: 44.01

GC content: 60.06

Gene sequence:

>2574_bases
ATGAGTGCACCATTCCAGCTGACCTCTAGCGATCCGAGTGTCATCGATCCTGTCGGATTAGCCGCAGATACCCACGAGTG
GATCGAGGCGGTGGTGCCAGGAGGAGTGCACGAAACCCTGATAGCGGCTGGGATCATCGCTCATCCATATGTAGAGGATC
ACGAAAAAGACTGTCGTTGGGTGGAGGATCGCGCCTGGTGGTATCGCGGAACGGTGCCGATCCCGGCGGGAGACGATCCG
CTCGTATTGACCCTGACCGGCGTCGATACCGTTGCAGACATCTGGGTCAACGGACACCACGTCGGTCGTCATGCCAACCA
GTACCGACCCTTCCAGGTTACGCTTCCGCCCATCGACGCCAACAAAGCCAAAGTACTCATCCGCTTCGCACCCCCATTAG
ATGGCCTGGCCGAGCCGCCAGCCACGAGAGCTATGGTCAACGCCGTCAGTGACTTCCTTAATGCCGCGGCCCCTCAGAAC
CTGGACGCCGAGCCTGGCTCGGGGATTCTCACCCTCGATCTGGCCGCGACTCGACGCCGTAAAGGCATGTTCTCGTGGGG
ATGGGATTTTGCTCCCCGTATCCCCTCGATCGGCCTGACGGGTCCCGTGGAGTTGACCCGTCGTTCACCGATCGAGGTGA
GCCATCACGTCGACACGATGGCCATCGGTGACGGCGACAGTGCAGACGTCAACGTCGTGGTGTCCACTGTCCACCACGAC
GGCCCTGCACCCTGTACCGTTGATGTCACCCTCACTTCGCCAGATGGTGATCGCGTCAGTGGACACGCCCAATTCAAACA
TGGTTCAGCCACCGTGGATCTCCAGCTGGATAACCCGCAACTGTGGTGGACCCATGACCTGGGCAAGCCTTCCCTCTACC
AGGTCGACATCAAGATCTGCGATAAGGACGCCAACACGATCGCTACTGATTCCGGCATGGCAGGTATCCGCACCATCGAG
GTGGACTGCTCCCCCGACACAGACGATCCCGAAATCGACGGGCCTGCCCGTCACTTCACGTTCATTATCAATGGCGTGCC
AGTCTTTGCCCGTGGCGCCAATCTGGTCCCGCAGTCGATGCTGCCGGGATCGGTGACTCCCCAGCAGGATCACGACCTTG
TCCGAGCCTGCCGCGATGCCAATATGACGATGGTGCGCGTCTGGGGCGGCGGTGTCTACGCTTCCGACGCCTTCATGACT
GCCTGTGACGAATACGGCATCCTCGTGTGGCACGACTTTATGTTCGCCTGCATTGACTATCCCGGCGACGATGAAGAGTT
CATGTCCGAGGTCCGTACCGAGGCTGACTATCAAACCCGCCGTCTCGCTAATCATCCGAGTCTGGCGCTGTGGGCTGGAG
GCAATGAGGTGCAGGCCATGCACCAGGCGGTCTGGAATAATCTTAACCTGGGCCCATGGGGATCCGAGATCTTCGACGAG
GTCTTGCCTGAGGCGGTTCGTCGCAACAGCCCCACCGTGAACTATTGGGCCAACAGCCCGGCCACTGATGTTGACACCGA
CCCTCGCGTTAATGGCACCAGGGCCGGTGATCGTCACGCATGGGAAGTGTGGCATGGCGCGGACGTGGGAGCAGGGACGC
ACGAGGATTATTCCAGCCCTGCCGAAGCCATGCACTATCACCGCTATAGCTATGACACCGGGCGGTTCATTAGCGAGTTT
GGCATCCACGCCAGTGCTGACCTACCCGCCCTCGGCAGGTGGTTAGGGAATGATCACCTCAACCTCGACGACCCCATTCT
TCTCGCGCGTAATAAGGACACCCCGAAGGCCAAAGGGATGGCCCTCATTGATTACGAAGTAGGCAAACCGACATCGGTTC
AGTCCTACGTCACCTACAGCCAGGTGGTGCAGGCCGAGGGACTCAAATTCGGCATCGAGCATTACCGGCGCCGTTGGCCT
CACTGCGCTGGCGCCCTAGTGTGGCAGCTCAATGAACCTTGGCCTGGAATGACGTGGTCCCTGCTCGACCACGACCTCGG
GGCCAAGCCGGGCTACTACGCTACAGCTCGAGCCTTCGCCCCGGCGCTGTCCATCCTGCGCCTGACTGACGATTCACTGG
AGGTATGGGTCAGCAATGCGCGTCCCACCCGAGTCACCGATACCGTGACAGTCACAATCGAAGGATTTGACGGAAGCATC
GACCAGACACATCGAGTCAAAGTATCCGTTCCTGCGTCCACCTCCCAGATGGTGTGGTCAGTACCGCGCGCCCAGATCCC
CGTCAACGGCAGCCACTACATATGGGTCGAAGGATCGGTTCTGCCTGCTAACCGACTCTTCCTGACACGCATCGGCGACC
TCAACTTGCCCGAGGCGCACCTCGACGTCAAGGTAGACGTGACGGAACCAACTACGGCCACAGTGACGGTGGCAACGACG
ACGTTCGCCTACTTTGTGCGAGTTCTGACGCCGTGGCCGGGTGCGCGACCCGACATCTCAGCCCTTGATCTACGTCCCGG
AACGAAGGCCGTCGTCACTGTGACTGGTCTTCCCGAAGGGTTCGACCCCGATGAGATCACAGTTCGCCACTTCCTCGACG
ACGTTGACCGATGA

Upstream 100 bases:

>100_bases
CAACCTTAGGAGGAAATCCCAGAGTTATCCTCCCCAACCATCAGCGAATACCAAGTCGTGCTAGGTTTTAGGTGTACTTT
GAGCCACCAAAGGAATCCTC

Downstream 100 bases:

>100_bases
CGTCGTCGGACTGACCGGCTCAACATGACGGGGGGCGCCCCAGTGGGCACCCCCCGTTCATCTGCTAAATCCTCAGTCGA
GGTAGTCGCGCAGTACCTGA

Product: beta-mannosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycosyl Hydrolase; Glycoside Hydrolase Family 2 Protein; Glycosidase; Coagulation Factor 5/8 Type Domain Protein; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Beta-Galactosidase/Beta- Glucuronidase Family Protein; O-Glycosyl Hydrolase; Beta-Galactosidase; Beta-D-Mannosidase; Beta-Mannosidase Man2A; DS Domain/Family 2 Glycosyl Hydrolase; Beta-Galactosidase/Beta; Exported Beta-Mannosidase-Like Glycosidase; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein

Number of amino acids: Translated: 857; Mature: 856

Protein sequence:

>857_residues
MSAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRWVEDRAWWYRGTVPIPAGDDP
LVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDANKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQN
LDAEPGSGILTLDLAATRRRKGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD
GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKICDKDANTIATDSGMAGIRTIE
VDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSMLPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMT
ACDEYGILVWHDFMFACIDYPGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNLGPWGSEIFDE
VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSPAEAMHYHRYSYDTGRFISEF
GIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGMALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWP
HCAGALVWQLNEPWPGMTWSLLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI
DQTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAHLDVKVDVTEPTTATVTVATT
TFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEGFDPDEITVRHFLDDVDR

Sequences:

>Translated_857_residues
MSAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRWVEDRAWWYRGTVPIPAGDDP
LVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDANKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQN
LDAEPGSGILTLDLAATRRRKGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD
GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKICDKDANTIATDSGMAGIRTIE
VDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSMLPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMT
ACDEYGILVWHDFMFACIDYPGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNLGPWGSEIFDE
VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSPAEAMHYHRYSYDTGRFISEF
GIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGMALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWP
HCAGALVWQLNEPWPGMTWSLLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI
DQTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAHLDVKVDVTEPTTATVTVATT
TFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEGFDPDEITVRHFLDDVDR
>Mature_856_residues
SAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRWVEDRAWWYRGTVPIPAGDDPL
VLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDANKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQNL
DAEPGSGILTLDLAATRRRKGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHDG
PAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKICDKDANTIATDSGMAGIRTIEV
DCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSMLPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMTA
CDEYGILVWHDFMFACIDYPGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNLGPWGSEIFDEV
LPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSPAEAMHYHRYSYDTGRFISEFG
IHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGMALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWPH
CAGALVWQLNEPWPGMTWSLLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSID
QTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAHLDVKVDVTEPTTATVTVATTT
FAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEGFDPDEITVRHFLDDVDR

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=710, Percent_Identity=24.7887323943662, Blast_Score=208, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17550784, Length=762, Percent_Identity=25.3280839895013, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24643838, Length=669, Percent_Identity=26.6068759342302, Blast_Score=177, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24643840, Length=572, Percent_Identity=27.7972027972028, Blast_Score=167, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.25

Molecular weight: Translated: 93992; Mature: 93861

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRW
CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCE
VEDRAWWYRGTVPIPAGDDPLVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDA
EECCCEEEECCEECCCCCCCEEEEEECCCEEEHHEECCEECCCCCCCCCCEEEEECCCCC
NKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQNLDAEPGSGILTLDLAATRRR
CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHH
KGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCEEEEECCCCCCCEEEEEEEEECC
GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKIC
CCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEE
DKDANTIATDSGMAGIRTIEVDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSM
CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCC
LPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMTACDEYGILVWHDFMFACIDY
CCCCCCCCCHHHHHHHHHCCCEEEEEEECCCEEECCHHHHHHHHCCEEEEECEEHHEECC
PGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNLGPWGSEIFDE
CCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHH
VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSP
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH
AEAMHYHRYSYDTGRFISEFGIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGM
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHCCE
ALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWPHCAGALVWQLNEPWPGMTWS
EEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
LLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI
HHHCCCCCCCCCEEHHHHHHHHHHEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCC
DQTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAH
CCCEEEEEECCCCCCHHEEECCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC
LDVKVDVTEPTTATVTVATTTFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEG
EEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCC
FDPDEITVRHFLDDVDR
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPFQLTSSDPSVIDPVGLAADTHEWIEAVVPGGVHETLIAAGIIAHPYVEDHEKDCRW
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCE
VEDRAWWYRGTVPIPAGDDPLVLTLTGVDTVADIWVNGHHVGRHANQYRPFQVTLPPIDA
EECCCEEEECCEECCCCCCCEEEEEECCCEEEHHEECCEECCCCCCCCCCEEEEECCCCC
NKAKVLIRFAPPLDGLAEPPATRAMVNAVSDFLNAAAPQNLDAEPGSGILTLDLAATRRR
CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHH
KGMFSWGWDFAPRIPSIGLTGPVELTRRSPIEVSHHVDTMAIGDGDSADVNVVVSTVHHD
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCEEEEECCCCCCCEEEEEEEEECC
GPAPCTVDVTLTSPDGDRVSGHAQFKHGSATVDLQLDNPQLWWTHDLGKPSLYQVDIKIC
CCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEE
DKDANTIATDSGMAGIRTIEVDCSPDTDDPEIDGPARHFTFIINGVPVFARGANLVPQSM
CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCC
LPGSVTPQQDHDLVRACRDANMTMVRVWGGGVYASDAFMTACDEYGILVWHDFMFACIDY
CCCCCCCCCHHHHHHHHHCCCEEEEEEECCCEEECCHHHHHHHHCCEEEEECEEHHEECC
PGDDEEFMSEVRTEADYQTRRLANHPSLALWAGGNEVQAMHQAVWNNLNLGPWGSEIFDE
CCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHH
VLPEAVRRNSPTVNYWANSPATDVDTDPRVNGTRAGDRHAWEVWHGADVGAGTHEDYSSP
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH
AEAMHYHRYSYDTGRFISEFGIHASADLPALGRWLGNDHLNLDDPILLARNKDTPKAKGM
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHCCE
ALIDYEVGKPTSVQSYVTYSQVVQAEGLKFGIEHYRRRWPHCAGALVWQLNEPWPGMTWS
EEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
LLDHDLGAKPGYYATARAFAPALSILRLTDDSLEVWVSNARPTRVTDTVTVTIEGFDGSI
HHHCCCCCCCCCEEHHHHHHHHHHEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCC
DQTHRVKVSVPASTSQMVWSVPRAQIPVNGSHYIWVEGSVLPANRLFLTRIGDLNLPEAH
CCCEEEEEECCCCCCHHEEECCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC
LDVKVDVTEPTTATVTVATTTFAYFVRVLTPWPGARPDISALDLRPGTKAVVTVTGLPEG
EEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCC
FDPDEITVRHFLDDVDR
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA