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The map label for this gene is fabD [H]

Identifier: 50842468

GI number: 50842468

Start: 1066907

End: 1067908

Strand: Reverse

Name: fabD [H]

Synonym: PPA0984

Alternate gene names: 50842468

Gene position: 1067908-1066907 (Counterclockwise)

Preceding gene: 50842469

Following gene: 50842467

Centisome position: 41.71

GC content: 62.87

Gene sequence:

>1002_bases
ATGACCACCGTGGGTACTTCGTCGGTTCCCTGTCTCGCGTCCGACCCTTCAAGGGGGCACAGTGGGGATGTGCTTGCAAT
TGTTGCTCCGGGCCAAGGGGCCCAGAAACCAGGATTCCTGTCGGATTGGATGTCAGACGCCACTTTCTCTGACCACCTTG
CGTGGCTCTCAGCAGTGGCAGATATCGATCTGGTGACCCATGGCACGACTTCCGACGAGGCAACCATCAAGGACACTGCG
GTTGCCCAGCCACTGCTGGTCGCCGCCGCGCTGGCCACAGCCTGGTCAGTTGATCCCAAGATTTTCTCTCAGGCCGACCT
GCTCGCCGGCCACTCTGTCGGGGAGATTGCCGCTGGCGCTGCTGCTGGGGCTTTCTCTGCCGAAGCCGCCATGGTTCTTG
TGCGCGAGCGCGGTCGGGCCATGGCCGAGGCCGCGTCACGCACTGCCACCTCCATGACTGCTGTCATCGGGGGCGATGCC
GACGAGGTGCTGACCGCCATTAAAGCCGCTGGGCTCACCCCAGCCAACCACAATGGCAAAGGCCAGATCGTAGCCGCAGG
CACCGTCGAACAGCTCGAAGCTTTCGCAGCCGAGCCGCCGTCTCGTACCCGACTCTTCCCGTTGTCGGTCGCGGGGGCCT
TCCACACGGCTCATATGGAACCGGCGGTCGATCACCTGCGCGAAGTAGCCGCTGCCATGCCGACCACGATCCCGACGGTG
GCCCTGCTGTCCAACCTTGACGGAGCCGTCGTCGCAGATGGTCGCGAATTCGCTGATCGTCTGGTCCAGCAGGTGGCCCA
TCCGGTGCGATGGGACCTGTGCATGGACACCATGGCTCAGCGCAATATCACCGGACTGCTCGAACTCACGCCCGCCGGAA
CACTGACAGGCATCGCCAAGCGCAACTTGAAGGGAGTGGAGTTGTTCAACCTCAACACCCCCGATCAGATCCCGGCTGCC
CGCGAGTTCATCACGACTCACTCCAGCAAGGAGAATGCATGA

Upstream 100 bases:

>100_bases
CTGCCGTCCTAGGACGACGGGAAGCTCAGAATCGCGCCTGATACGACCCACACATCCGGTTTTTGGAGGATCCCCCCTGT
CATTTTGTGGGGATCCCACA

Downstream 100 bases:

>100_bases
CGGCCATCAAGACCCGTCCCGTCCACGGCTACTCGAAATTCCTGTCCACCGGATCAGCTCGCGGATCGCGAGTAGTCACC
AACAAGGAGATGTGCACGCT

Product: acyl-carrier-protein S-malonyltransferase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVADIDLVTHGTTSDEATIKDTA
VAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGAAAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDA
DEVLTAIKAAGLTPANHNGKGQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV
ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAKRNLKGVELFNLNTPDQIPAA
REFITTHSSKENA

Sequences:

>Translated_333_residues
MTTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVADIDLVTHGTTSDEATIKDTA
VAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGAAAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDA
DEVLTAIKAAGLTPANHNGKGQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV
ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAKRNLKGVELFNLNTPDQIPAA
REFITTHSSKENA
>Mature_332_residues
TTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVADIDLVTHGTTSDEATIKDTAV
AQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGAAAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDAD
EVLTAIKAAGLTPANHNGKGQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTVA
LLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAKRNLKGVELFNLNTPDQIPAAR
EFITTHSSKENA

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Escherichia coli, GI1787334, Length=306, Percent_Identity=31.6993464052288, Blast_Score=120, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17550940, Length=233, Percent_Identity=29.1845493562232, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24665753, Length=273, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 34384; Mature: 34253

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVA
CCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
DIDLVTHGTTSDEATIKDTAVAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGA
HHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCH
AAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDADEVLTAIKAAGLTPANHNGK
HCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCC
GQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV
EEEEECCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAK
HHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
RNLKGVELFNLNTPDQIPAAREFITTHSSKENA
CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTVGTSSVPCLASDPSRGHSGDVLAIVAPGQGAQKPGFLSDWMSDATFSDHLAWLSAVA
CCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
DIDLVTHGTTSDEATIKDTAVAQPLLVAAALATAWSVDPKIFSQADLLAGHSVGEIAAGA
HHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCH
AAGAFSAEAAMVLVRERGRAMAEAASRTATSMTAVIGGDADEVLTAIKAAGLTPANHNGK
HCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCC
GQIVAAGTVEQLEAFAAEPPSRTRLFPLSVAGAFHTAHMEPAVDHLREVAAAMPTTIPTV
EEEEECCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
ALLSNLDGAVVADGREFADRLVQQVAHPVRWDLCMDTMAQRNITGLLELTPAGTLTGIAK
HHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
RNLKGVELFNLNTPDQIPAAREFITTHSSKENA
CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]