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The map label for this gene is yxjL [H]

Identifier: 50842410

GI number: 50842410

Start: 1009882

End: 1010538

Strand: Direct

Name: yxjL [H]

Synonym: PPA0926

Alternate gene names: 50842410

Gene position: 1009882-1010538 (Clockwise)

Preceding gene: 50842409

Following gene: 50842411

Centisome position: 39.44

GC content: 63.17

Gene sequence:

>657_bases
ATGCGCGTCGTGCTGGTCGACGACCAGAAACTAGTTCGTCAAGGGTTTCGCCTCATCCTCGCGGTGGAGCCCGACATCAC
GGTTGTTGGGGAGGCCACCAACGGGGCTGAGGGCGTGGACGTATTGAAGGAAACCGCTCCCGACGTCGTCCTCATGGACG
TCCAGATGCCCGTCATGGATGGTGTCGCGGCCACCGCGAAGATCCGCGAGTTCAGCGACGTCAAGGTCGTCATCCTCACC
ACCTTCGACCGGGACGACTACCTCTTCGATGCTCTCGACGCCGGGGCCAGCGGATTCATGCTCAAGAATGCTGAGGCAGA
GTCGCTCGTCGCCGGTCTGCGTCAGGTCGCTGACGGGCATGCCCTGCTGGCTCCCGAGGTGACCCGGCGAGTTATCGCCC
GGTCGGTGCATCAGGGGAGCACGGTGACCGGCAGCAAGGCCGAGCAGCTCACCGCCCGCGAGATCGAGGTGGCCAAATTG
GTGGCTCGGGGCCTGTCCAATGCTGAGATCGCCGAGGAACTTGTCGTCTCCGCAGCCACCGTCAAGACCCATGTTTCCAA
CTGCCTCATGAAGTGTGACCTGCGTGATCGGGTTCAACTCGTCGCCCTGGCTTACGAGTCGGGACTCATCCGTGTGGGGG
AGCCTTCCCGAGACTGA

Upstream 100 bases:

>100_bases
TGGGTCCACGCAAGGTCGGTGGATGGCGAGTTCGTGCCGTCATGCCGATGCGTCAGAGCCAGGATGTGAGGGACGAGGAC
ATGAAGGAGGGGGAGGACTG

Downstream 100 bases:

>100_bases
AATCCGTCTTGCCGCCGATGCGCAATGACCAGAAATTGGGTGTGATGGTCATGTGATCGCAAATCGAGGACGCAGGAGGT
AGCCATGATCGACACGGACA

Product: putative two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVLKETAPDVVLMDVQMPVMDGVAATAKIREFSDVKVVILT
TFDRDDYLFDALDAGASGFMLKNAEAESLVAGLRQVADGHALLAPEVTRRVIARSVHQGSTVTGSKAEQLTAREIEVAKL
VARGLSNAEIAEELVVSAATVKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD

Sequences:

>Translated_218_residues
MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVLKETAPDVVLMDVQMPVMDGVAATAKIREFSDVKVVILT
TFDRDDYLFDALDAGASGFMLKNAEAESLVAGLRQVADGHALLAPEVTRRVIARSVHQGSTVTGSKAEQLTAREIEVAKL
VARGLSNAEIAEELVVSAATVKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD
>Mature_218_residues
MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVLKETAPDVVLMDVQMPVMDGVAATAKIREFSDVKVVILT
TFDRDDYLFDALDAGASGFMLKNAEAESLVAGLRQVADGHALLAPEVTRRVIARSVHQGSTVTGSKAEQLTAREIEVAKL
VARGLSNAEIAEELVVSAATVKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=205, Percent_Identity=36.0975609756098, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1788222, Length=210, Percent_Identity=33.8095238095238, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=35.1758793969849, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790102, Length=198, Percent_Identity=30.8080808080808, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=26.5700483091787, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788712, Length=208, Percent_Identity=25.4807692307692, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87082052, Length=118, Percent_Identity=33.8983050847458, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788546, Length=205, Percent_Identity=26.3414634146341, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23412; Mature: 23412

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVLKETAPDVVLMDVQMPVMD
CEEEEECCHHHHHCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHC
GVAATAKIREFSDVKVVILTTFDRDDYLFDALDAGASGFMLKNAEAESLVAGLRQVADGH
CHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
ALLAPEVTRRVIARSVHQGSTVTGSKAEQLTAREIEVAKLVARGLSNAEIAEELVVSAAT
EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD
HHHHHHHHHHHCCCHHHHHEEEEEHHCCEEEECCCCCC
>Mature Secondary Structure
MRVVLVDDQKLVRQGFRLILAVEPDITVVGEATNGAEGVDVLKETAPDVVLMDVQMPVMD
CEEEEECCHHHHHCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHC
GVAATAKIREFSDVKVVILTTFDRDDYLFDALDAGASGFMLKNAEAESLVAGLRQVADGH
CHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
ALLAPEVTRRVIARSVHQGSTVTGSKAEQLTAREIEVAKLVARGLSNAEIAEELVVSAAT
EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKTHVSNCLMKCDLRDRVQLVALAYESGLIRVGEPSRD
HHHHHHHHHHHCCCHHHHHEEEEEHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]