| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is gutB [H]
Identifier: 50842402
GI number: 50842402
Start: 999077
End: 1000123
Strand: Reverse
Name: gutB [H]
Synonym: PPA0918
Alternate gene names: 50842402
Gene position: 1000123-999077 (Counterclockwise)
Preceding gene: 50842403
Following gene: 50842398
Centisome position: 39.06
GC content: 59.03
Gene sequence:
>1047_bases ATGAAGGCATTGAGGTTCCACGCACCCGAGGACGTTCGTCTCGAAGACGTCCCCGAACCGGAATGCAAGTCCGACGAGAT CAAGATCAAGGTTCGCAACTGCTCCACCTGTGGTACCGACGTCAAAATCCTTCACAACGGCCACCAGAACATCACCGGAG TCACGATAATGGGCCACGAAGTTGCTGGCGAGATCGTCGAAATCGGCTCCGAGGTGGCTGGCGACTGGAAGATCGGCGAT CGGGTCCAGTCGATCGCCGCTGTCCCGTGCGGGCAGTGCCACGAATGCCGCAAAGGGTGGATGCAGGTCTGCCAAAACCA GACCAGCGTCGGTTATCAGTACGACGGTGGTTTTGCGGAATATATGATCGTCCCGCCGCAAGTACTCAAGGTAGACGGCC TCAATCGCATCCCCGACGACGTCGATTTCGACGAGGCCAGCGCCGCCGAACCTTTCGCCTGCGCCATCAACGCCCAGGAA CAACTCGGCATCGAAAAAGGTGACTTCCTCGCCATCTTTGGCGCCGGCCCGATCGGGTGCATGCACACCCGTATCGCGCG TGGCGTGCACAAGGTCGGCACTATCGTCATGATTGACATCAACGCCGAACGCCTCGCATTGTCAGCCGCTGCCGTCAAGC CCGACATCACCATCGACGGTTCACAGGAGGATGTCGTCGCCAAAGTCATGGAACTTACCAACGGTCGCGGTGCTGACGTC ATCATCACCGCGACCCCGGCCAACATCACCCAGGAACAGGCCTTGTCCATGGCTGCCCGCAATGGCCGTATTTCTTTCTT CGGCGGCCTGCCCAAGACGAACCCAACGATCACCTGCGACTCGAACCTGATCCATTACCGTCAACTCCACATCCACGGCG CCAATGGCTCGGCCCCCGAGCACAACAAACGTGCCTTGCAGTACATCGCCTCGGGACAGGTTCCGGTTAAGGATCTCATC ACCCGTCACGTCAAACTCGACGACGTCATGACGGTCTTCGATATCGTCGCCAAGGGCGAAGCCATCAAAGTGACCGTCGA GCCCTGA
Upstream 100 bases:
>100_bases ACCGCCCGGCAACTTCGTGAGGCGACATGCACCGACGAGGTCCTCAACCTCCTCGGTTCCCAGCAGGCATAATCAGCGGA TCTATAGAAAGGCACACATC
Downstream 100 bases:
>100_bases ACCCAACGAACCAAGTTCTCAATCGCAAGCGGTGAGGTTAGCCATAGCCCGCAACTGGGCTAAGCCGACCACACCGGCGG TCGAGGTTCTCAATACCCCG
Product: putative zinc-binding sorbitol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKALRFHAPEDVRLEDVPEPECKSDEIKIKVRNCSTCGTDVKILHNGHQNITGVTIMGHEVAGEIVEIGSEVAGDWKIGD RVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAEYMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQE QLGIEKGDFLAIFGAGPIGCMHTRIARGVHKVGTIVMIDINAERLALSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPEHNKRALQYIASGQVPVKDLI TRHVKLDDVMTVFDIVAKGEAIKVTVEP
Sequences:
>Translated_348_residues MKALRFHAPEDVRLEDVPEPECKSDEIKIKVRNCSTCGTDVKILHNGHQNITGVTIMGHEVAGEIVEIGSEVAGDWKIGD RVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAEYMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQE QLGIEKGDFLAIFGAGPIGCMHTRIARGVHKVGTIVMIDINAERLALSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPEHNKRALQYIASGQVPVKDLI TRHVKLDDVMTVFDIVAKGEAIKVTVEP >Mature_348_residues MKALRFHAPEDVRLEDVPEPECKSDEIKIKVRNCSTCGTDVKILHNGHQNITGVTIMGHEVAGEIVEIGSEVAGDWKIGD RVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAEYMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQE QLGIEKGDFLAIFGAGPIGCMHTRIARGVHKVGTIVMIDINAERLALSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPEHNKRALQYIASGQVPVKDLI TRHVKLDDVMTVFDIVAKGEAIKVTVEP
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=363, Percent_Identity=26.1707988980716, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI156523966, Length=313, Percent_Identity=25.5591054313099, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI4501939, Length=221, Percent_Identity=26.2443438914027, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1790045, Length=353, Percent_Identity=31.4447592067989, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1788075, Length=358, Percent_Identity=30.1675977653631, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI1788073, Length=329, Percent_Identity=28.5714285714286, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI226510992, Length=346, Percent_Identity=25.4335260115607, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082125, Length=361, Percent_Identity=25.7617728531856, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1787863, Length=269, Percent_Identity=28.996282527881, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788407, Length=295, Percent_Identity=28.8135593220339, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI48994910, Length=362, Percent_Identity=26.5193370165746, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786825, Length=272, Percent_Identity=28.6764705882353, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081918, Length=324, Percent_Identity=28.7037037037037, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562876, Length=350, Percent_Identity=26.5714285714286, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562878, Length=348, Percent_Identity=27.2988505747126, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71988145, Length=329, Percent_Identity=26.4437689969605, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562582, Length=342, Percent_Identity=24.5614035087719, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562584, Length=346, Percent_Identity=25.7225433526012, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322619, Length=350, Percent_Identity=25.1428571428571, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319955, Length=350, Percent_Identity=25.1428571428571, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323099, Length=348, Percent_Identity=22.4137931034483, Blast_Score=86, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=355, Percent_Identity=27.3239436619718, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319258, Length=364, Percent_Identity=24.7252747252747, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6323729, Length=348, Percent_Identity=25.5747126436782, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319621, Length=356, Percent_Identity=26.4044943820225, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324486, Length=353, Percent_Identity=24.3626062322946, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319257, Length=293, Percent_Identity=26.2798634812287, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737897, Length=353, Percent_Identity=29.7450424929178, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI17137530, Length=349, Percent_Identity=28.6532951289398, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 37582; Mature: 37582
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRFHAPEDVRLEDVPEPECKSDEIKIKVRNCSTCGTDVKILHNGHQNITGVTIMGHE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECHH VAGEIVEIGSEVAGDWKIGDRVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAE HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCEEE YMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQEQLGIEKGDFLAIFGAGPIGC EEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCEEEEECCCCHHH MHTRIARGVHKVGTIVMIDINAERLALSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV HHHHHHHHHHHCCEEEEEEECHHHEEEEHHHCCCCEEECCCHHHHHHHHHHHCCCCCCEE IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPE EEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCEEEEEEEEEECCCCCCCC HNKRALQYIASGQVPVKDLITRHVKLDDVMTVFDIVAKGEAIKVTVEP HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MKALRFHAPEDVRLEDVPEPECKSDEIKIKVRNCSTCGTDVKILHNGHQNITGVTIMGHE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECHH VAGEIVEIGSEVAGDWKIGDRVQSIAAVPCGQCHECRKGWMQVCQNQTSVGYQYDGGFAE HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCEEE YMIVPPQVLKVDGLNRIPDDVDFDEASAAEPFACAINAQEQLGIEKGDFLAIFGAGPIGC EEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCEEEEECCCCHHH MHTRIARGVHKVGTIVMIDINAERLALSAAAVKPDITIDGSQEDVVAKVMELTNGRGADV HHHHHHHHHHHCCEEEEEEECHHHEEEEHHHCCCCEEECCCHHHHHHHHHHHCCCCCCEE IITATPANITQEQALSMAARNGRISFFGGLPKTNPTITCDSNLIHYRQLHIHGANGSAPE EEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCEEEEEEEEEECCCCCCCC HNKRALQYIASGQVPVKDLITRHVKLDDVMTVFDIVAKGEAIKVTVEP HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]