| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842396
Identifier: 50842396
GI number: 50842396
Start: 993629
End: 994528
Strand: Direct
Name: 50842396
Synonym: PPA0912
Alternate gene names: NA
Gene position: 993629-994528 (Clockwise)
Preceding gene: 50842395
Following gene: 50842397
Centisome position: 38.81
GC content: 57.89
Gene sequence:
>900_bases ATGGTCACACGTGGCAATACAGTGGCTATCGTGATCGATCGGTACTCTCACGACGTCCTTGCAAGCGGCTGGCGCACCTC TCACATGAAGAAGAGCGCTGACATGCCACTGGAACTTGGCATGGTCGTTGAGGATCCTTCCAGCGGATTCGTGGGGGCTG TCGTCGGGTGGCAAAACGGCCTGGTTGTGCTTGAGGACCGCAAGGGTAAACGCAAATCCTTCCCCGTTGGACCGGGGTTC TGGGTGGACGGGCAACCCGTCAACCTGTGTATTCCCCCTCGTCAAGGAAGCGCGAGTATCAAACACACGGCGTCTGGGTC CATCGCCGGTGGTGCTAAACCGGCCCGAGTTGCCCTTCCTAGCCGGATATACGTCGAGGGACGTCATGACGCTGAACTCG TCGAAAAGATATGGGGCGACGACCTGCGCCACGTCGGGGTCGTTGTGGAACACATGGGTGGCATGGACGACCTCGTCGGG ATCGTCGCCGAGTTTAAGCCTGGTCCGGGGCATCGCCTTGGCGTGTTGGTTGACCACCTCATTGCCGGCACCAAGGAGTC ACGGGTAGCGGACGAAGTACGTCGTGGTGGGTATAGCGAGTATGTCATGATTACCGGTCATCGCTTTATTGACATCTGGC AGGCCATCAAACCTCAACGAATTGGCCGTCAAGAATGGCCTGAGGTCCCGATGGACGAAGACTTCAAACTCGGCACCCTG AAGCGTCTGGGCCTGCCTCACTCGACTCAAGCTGACGTCGGTAAGGCCTGGCAGGCCATGCTGGCACGAGTGCGCGACTG GCACGATTTAGACCCCCGCTTTAACACGGAGATGGAGAAACTTATCGATTTCGTCACGTGTGACCATGTTGACGAGCTGG ACAATGAGGAGATGGCATGA
Upstream 100 bases:
>100_bases GTCAGGTCGAATGGTGGCTGACCGAATCATTACCGATCTCCTGGTCTAGCCGTCTTCATCCACCAGGTCGTCAGGTCGGC CGCTAGCGCGGCTTGTCGTC
Downstream 100 bases:
>100_bases GTATTGACGTCGACGCGGTGTCTGACCTCATCCGGGATGTGAGTGCCAGGGTTATCGATCCCCGGTTCCGGACCCTCGAC GATCATCAAATCCACCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MVTRGNTVAIVIDRYSHDVLASGWRTSHMKKSADMPLELGMVVEDPSSGFVGAVVGWQNGLVVLEDRKGKRKSFPVGPGF WVDGQPVNLCIPPRQGSASIKHTASGSIAGGAKPARVALPSRIYVEGRHDAELVEKIWGDDLRHVGVVVEHMGGMDDLVG IVAEFKPGPGHRLGVLVDHLIAGTKESRVADEVRRGGYSEYVMITGHRFIDIWQAIKPQRIGRQEWPEVPMDEDFKLGTL KRLGLPHSTQADVGKAWQAMLARVRDWHDLDPRFNTEMEKLIDFVTCDHVDELDNEEMA
Sequences:
>Translated_299_residues MVTRGNTVAIVIDRYSHDVLASGWRTSHMKKSADMPLELGMVVEDPSSGFVGAVVGWQNGLVVLEDRKGKRKSFPVGPGF WVDGQPVNLCIPPRQGSASIKHTASGSIAGGAKPARVALPSRIYVEGRHDAELVEKIWGDDLRHVGVVVEHMGGMDDLVG IVAEFKPGPGHRLGVLVDHLIAGTKESRVADEVRRGGYSEYVMITGHRFIDIWQAIKPQRIGRQEWPEVPMDEDFKLGTL KRLGLPHSTQADVGKAWQAMLARVRDWHDLDPRFNTEMEKLIDFVTCDHVDELDNEEMA >Mature_299_residues MVTRGNTVAIVIDRYSHDVLASGWRTSHMKKSADMPLELGMVVEDPSSGFVGAVVGWQNGLVVLEDRKGKRKSFPVGPGF WVDGQPVNLCIPPRQGSASIKHTASGSIAGGAKPARVALPSRIYVEGRHDAELVEKIWGDDLRHVGVVVEHMGGMDDLVG IVAEFKPGPGHRLGVLVDHLIAGTKESRVADEVRRGGYSEYVMITGHRFIDIWQAIKPQRIGRQEWPEVPMDEDFKLGTL KRLGLPHSTQADVGKAWQAMLARVRDWHDLDPRFNTEMEKLIDFVTCDHVDELDNEEMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33110; Mature: 33110
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRGNTVAIVIDRYSHDVLASGWRTSHMKKSADMPLELGMVVEDPSSGFVGAVVGWQNG CCCCCCEEEEEEECCCCHHHHCCCHHHHHHHCCCCCEEECEEEECCCCCCEEEEEECCCC LVVLEDRKGKRKSFPVGPGFWVDGQPVNLCIPPRQGSASIKHTASGSIAGGAKPARVALP EEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEECC SRIYVEGRHDAELVEKIWGDDLRHVGVVVEHMGGMDDLVGIVAEFKPGPGHRLGVLVDHL CEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH IAGTKESRVADEVRRGGYSEYVMITGHRFIDIWQAIKPQRIGRQEWPEVPMDEDFKLGTL HCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHCCHHHCCCCCCCCCCCCCHH KRLGLPHSTQADVGKAWQAMLARVRDWHDLDPRFNTEMEKLIDFVTCDHVDELDNEEMA HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MVTRGNTVAIVIDRYSHDVLASGWRTSHMKKSADMPLELGMVVEDPSSGFVGAVVGWQNG CCCCCCEEEEEEECCCCHHHHCCCHHHHHHHCCCCCEEECEEEECCCCCCEEEEEECCCC LVVLEDRKGKRKSFPVGPGFWVDGQPVNLCIPPRQGSASIKHTASGSIAGGAKPARVALP EEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEECC SRIYVEGRHDAELVEKIWGDDLRHVGVVVEHMGGMDDLVGIVAEFKPGPGHRLGVLVDHL CEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH IAGTKESRVADEVRRGGYSEYVMITGHRFIDIWQAIKPQRIGRQEWPEVPMDEDFKLGTL HCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHCCHHHCCCCCCCCCCCCCHH KRLGLPHSTQADVGKAWQAMLARVRDWHDLDPRFNTEMEKLIDFVTCDHVDELDNEEMA HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA