| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is menB [H]
Identifier: 50842391
GI number: 50842391
Start: 988821
End: 989810
Strand: Reverse
Name: menB [H]
Synonym: PPA0907
Alternate gene names: 50842391
Gene position: 989810-988821 (Counterclockwise)
Preceding gene: 50842392
Following gene: 50842390
Centisome position: 38.66
GC content: 63.03
Gene sequence:
>990_bases GTGAGCACCCTTCCTTTCGTTTCTGACACTTTTGATGCAGCCCGCTGGCGCGATGTTGACCTTCCCGGGGCTCCGCTGAC CGACATGACCTTCCATCGCCTCGTGTCTCGGGGCAAGTCTGACCACGCCCCGGCTGGGGAGGATCTGCCGGTGGTACGCA TTGCCTTCGACCGCCCGGCCATCCGCAACGCCTTCCGCCCCCACACGGTTGACGAGTTGTACCGCTGTATCGACGCCGCC CGTTGCACCCCAGATGTTGCGGCACTCATCCTCACTGGCAATGGCCCTTCCCCGCGCGACGGTGGGTACGCCTTCTGCTC AGGCGGCGACCAGCGGATCCGCGGAGCCGCCGGATACCAGTACGAGTCGCAGGAAACCTCCGGCGACGAGGACCTGGCCA CCGACGCCCGACGCGAACACATCGAGAAGGGACGGCTGGGACGTCTTCACATCCTTGAGGTGCAACGCCTCATGCGTGCC ACCCCCAAACCGATCATCGCCGCCATCCCTGGATGGACAACCGGCGGCGGCCACTCCCTCATGGTGGTAGCCGATATGGC CGTGGCCAGCCGCGAGTACGCCAGGTTTAAGCAGGTTGATGCCAACGTCGGTTCATTTGATGCCGGGTACGGTTCGGCCC TACTGGCACGCCAGATCGGTGACAAGCGAGCCCGCGAGATCTTCTTCCTCGCCGAAACATATGACGCCGAGCAGGCCGAA AAGTGGGGCGTCATCAACCAGGCCGTTGACCACGCTGAATTGGAGAACACCGCCATTGAGTGGGGACTGACGATCGCTGG CAAATCCCCGCAGGCGATCCGGATGCTCAAGTATGCCTTTAATATGGTTGACGACGGCATCGCTGGTCAGCAGGCATTCG CTGGTGAGGCGACCCGGATGGCATATATGACCGAGGAGGCCCAGGAGGGGCGTGACGCCTTCCTCGAGCACCGCTCCCCG GACTGGTCCGACTACCCCTATTACTTCTGA
Upstream 100 bases:
>100_bases CTCCTGGCAGGCTCACCTCGGCGGGGCGGTCGGTGGCGTCATCTCGGCGTCGCGGCTAGCTCGTCATTCCAGGTAGGCAG GCAGTGGTAACTTCCACCGG
Downstream 100 bases:
>100_bases GGCCGTCGTGGGATCCGAGCTGACATCGCGGGTGCGGGTGGTACGCGTCGAGCGCACGCGCGAAGACGTCGACTGGCTGG CTGGGCGTCTGACCGAAGTG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSTLPFVSDTFDAARWRDVDLPGAPLTDMTFHRLVSRGKSDHAPAGEDLPVVRIAFDRPAIRNAFRPHTVDELYRCIDAA RCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQYESQETSGDEDLATDARREHIEKGRLGRLHILEVQRLMRA TPKPIIAAIPGWTTGGGHSLMVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE KWGVINQAVDHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRMAYMTEEAQEGRDAFLEHRSP DWSDYPYYF
Sequences:
>Translated_329_residues MSTLPFVSDTFDAARWRDVDLPGAPLTDMTFHRLVSRGKSDHAPAGEDLPVVRIAFDRPAIRNAFRPHTVDELYRCIDAA RCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQYESQETSGDEDLATDARREHIEKGRLGRLHILEVQRLMRA TPKPIIAAIPGWTTGGGHSLMVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE KWGVINQAVDHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRMAYMTEEAQEGRDAFLEHRSP DWSDYPYYF >Mature_328_residues STLPFVSDTFDAARWRDVDLPGAPLTDMTFHRLVSRGKSDHAPAGEDLPVVRIAFDRPAIRNAFRPHTVDELYRCIDAAR CTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQYESQETSGDEDLATDARREHIEKGRLGRLHILEVQRLMRAT PKPIIAAIPGWTTGGGHSLMVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAEK WGVINQAVDHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRMAYMTEEAQEGRDAFLEHRSPD WSDYPYYF
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=286, Percent_Identity=25.5244755244755, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI31542718, Length=175, Percent_Identity=30.8571428571429, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1788597, Length=275, Percent_Identity=41.8181818181818, Blast_Score=211, Evalue=7e-56, Organism=Escherichia coli, GI1787659, Length=281, Percent_Identity=25.6227758007117, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082183, Length=177, Percent_Identity=29.3785310734463, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787660, Length=274, Percent_Identity=27.3722627737226, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI221142681, Length=166, Percent_Identity=29.5180722891566, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17540714, Length=237, Percent_Identity=27.4261603375527, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17554946, Length=282, Percent_Identity=25.886524822695, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17536985, Length=253, Percent_Identity=30.0395256916996, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI20129971, Length=287, Percent_Identity=26.1324041811847, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24653477, Length=287, Percent_Identity=26.1324041811847, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24653139, Length=278, Percent_Identity=23.021582733813, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 36313; Mature: 36182
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPFVSDTFDAARWRDVDLPGAPLTDMTFHRLVSRGKSDHAPAGEDLPVVRIAFDRPA CCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHH IRNAFRPHTVDELYRCIDAARCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQ HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCC YESQETSGDEDLATDARREHIEKGRLGRLHILEVQRLMRATPKPIIAAIPGWTTGGGHSL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEE MVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCHHHHH KWGVINQAVDHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRM HCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHH AYMTEEAQEGRDAFLEHRSPDWSDYPYYF HHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STLPFVSDTFDAARWRDVDLPGAPLTDMTFHRLVSRGKSDHAPAGEDLPVVRIAFDRPA CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHH IRNAFRPHTVDELYRCIDAARCTPDVAALILTGNGPSPRDGGYAFCSGGDQRIRGAAGYQ HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCC YESQETSGDEDLATDARREHIEKGRLGRLHILEVQRLMRATPKPIIAAIPGWTTGGGHSL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEE MVVADMAVASREYARFKQVDANVGSFDAGYGSALLARQIGDKRAREIFFLAETYDAEQAE EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCHHHHH KWGVINQAVDHAELENTAIEWGLTIAGKSPQAIRMLKYAFNMVDDGIAGQQAFAGEATRM HCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHH AYMTEEAQEGRDAFLEHRSPDWSDYPYYF HHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA