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The map label for this gene is 50842383

Identifier: 50842383

GI number: 50842383

Start: 977948

End: 978913

Strand: Direct

Name: 50842383

Synonym: PPA0897

Alternate gene names: NA

Gene position: 977948-978913 (Clockwise)

Preceding gene: 50842382

Following gene: 50842385

Centisome position: 38.2

GC content: 59.42

Gene sequence:

>966_bases
GTGAACTCGGTCTATGGCACGGCTTTGTTGGTCCAGGGTGCGGAGGCCCTATTGTCGGACAGGGCCGTTGACGCCCGGAT
CAAGGCCGCCCGTCGGGAGTTTCCAGATGCCGAACTCGTCGAGTTGGAAGGTCGGGAAGTCGACGCTGGGCGATTCGTTG
AGGCCACCGGAGGGTCACTGTTTAGTCAAGCGACGATCGTCGTCGTCAATGCTGTGTCTGATCTCGACAAGGATCTGTTT
GACCTTGTTGCCACCACTGCAGCAAATCCTCCTGACACCCTGTGTCTCATCTTGGTCCATCCAGGCGGGGTCAAAGGTAA
AGGGTTGCTGACCAAACTCACGAAAGCCAAGGTGGAGACCGCCAAAGTCGATGTCCCTAAGCCATGGGCGATCCCGGACT
TCATCGTAAATGAGGCACGTCGGGGCCACCTCGACATGGACCGCGACGCCGTCAATGCTCTGCACCAGGCTCTCGGAAAC
GATTTGCGCACTCTGGCAGCAGCTGTCGGTCAGCTCGCGAGCGATTCCCCGAATGGGCGAGTTGGAGCTGAGGCGGTCAC
GACCTATTTCGGTGGAAGGGCGGAGATTTCGGCTTTTAATGTTTCCGACGCCAGCTTAGAAGGACGGCTCCCTGATGCGT
TGGAGGCCTTACGCTGGGCCTTGTCGATCGGGGTGCAACCGGCTGCGGTGACGGCTGCGATGGCACGCGGACTGCGGTCG
GTGGGTCTCTACCTGGATCTGCGAAGCCAGCGGATGGGGGATAAGCAACTCGCCCAAACTATTGGCGTATCGCCATGGAA
ACTCAAGTCCCTCAACAAGCAGGCTCGGTCGTGGAGCAAAGCTGGCGTCGCAAGAGCTATCCGGCTCGTCAACACGTGCG
ATGCTGCCGTCAAAGGGGCTGCTGTTGACCCCGATTATGCCCTGGAATCGATGCTGATCGCTATCGAGGAGGCTCGCCAA
GCCTGA

Upstream 100 bases:

>100_bases
AGAGATATTTGGGTAGACCTACGGTGAAAAGGGAGTATGGCCCATGTAGGCTTCACTCGCTCACTGGCGCGGCTACCGAT
CCTGCGGCATCCTTGGACAG

Downstream 100 bases:

>100_bases
TCGGGGCCGCCCATCGGTTGGGCGGGCTTAGTGCTTCTCCCATCGGGGACACACATCAAGCGCCCCAACCACCCAGTGGG
TCGAGGCGCTGTGTGTATTC

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III; DNA Polymerase III Delta; DNA-Directed DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVELEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLF
DLVATTAANPPDTLCLILVHPGGVKGKGLLTKLTKAKVETAKVDVPKPWAIPDFIVNEARRGHLDMDRDAVNALHQALGN
DLRTLAAAVGQLASDSPNGRVGAEAVTTYFGGRAEISAFNVSDASLEGRLPDALEALRWALSIGVQPAAVTAAMARGLRS
VGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKAGVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIEEARQ
A

Sequences:

>Translated_321_residues
MNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVELEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLF
DLVATTAANPPDTLCLILVHPGGVKGKGLLTKLTKAKVETAKVDVPKPWAIPDFIVNEARRGHLDMDRDAVNALHQALGN
DLRTLAAAVGQLASDSPNGRVGAEAVTTYFGGRAEISAFNVSDASLEGRLPDALEALRWALSIGVQPAAVTAAMARGLRS
VGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKAGVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIEEARQ
A
>Mature_321_residues
MNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVELEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLF
DLVATTAANPPDTLCLILVHPGGVKGKGLLTKLTKAKVETAKVDVPKPWAIPDFIVNEARRGHLDMDRDAVNALHQALGN
DLRTLAAAVGQLASDSPNGRVGAEAVTTYFGGRAEISAFNVSDASLEGRLPDALEALRWALSIGVQPAAVTAAMARGLRS
VGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKAGVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIEEARQ
A

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33991; Mature: 33991

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVELEGREVDAGRFVEATGGSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEECCCCCH
FSQATIVVVNAVSDLDKDLFDLVATTAANPPDTLCLILVHPGGVKGKGLLTKLTKAKVET
HHCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
AKVDVPKPWAIPDFIVNEARRGHLDMDRDAVNALHQALGNDLRTLAAAVGQLASDSPNGR
HCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGAEAVTTYFGGRAEISAFNVSDASLEGRLPDALEALRWALSIGVQPAAVTAAMARGLRS
CCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKAGVARAIRLVNTCDAAVKGA
HHHEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AVDPDYALESMLIAIEEARQA
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVELEGREVDAGRFVEATGGSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEECCCCCH
FSQATIVVVNAVSDLDKDLFDLVATTAANPPDTLCLILVHPGGVKGKGLLTKLTKAKVET
HHCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
AKVDVPKPWAIPDFIVNEARRGHLDMDRDAVNALHQALGNDLRTLAAAVGQLASDSPNGR
HCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGAEAVTTYFGGRAEISAFNVSDASLEGRLPDALEALRWALSIGVQPAAVTAAMARGLRS
CCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKAGVARAIRLVNTCDAAVKGA
HHHEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AVDPDYALESMLIAIEEARQA
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA