| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is ulaE [H]
Identifier: 50842368
GI number: 50842368
Start: 958215
End: 959102
Strand: Direct
Name: ulaE [H]
Synonym: PPA0881
Alternate gene names: 50842368
Gene position: 958215-959102 (Clockwise)
Preceding gene: 50842367
Following gene: 50842369
Centisome position: 37.43
GC content: 61.6
Gene sequence:
>888_bases ATGACCGAATCACTGACCGACGGGGTGACCCTCGGCATCTATGAGAAAGCCCTCGTCAGCAACCCCTTGGCTACCGACGA CGACTGGCGACGCTTCCTAAACCAGGTACCCGAGGCAGGATTCAGCTTCGTCGACCTGTCCGTCGATGAGTCTGAAGAGA GGATGGCACGGCTCGGATGGGACCAGCGCCGGCGTCGCATGGTGCGCCATTGCGTTGAGGCCACAGAAACCGCTATTGGT GGTGTCTGCTTGTCGGTACATCGGCGTATTGGCCCTGGTAGTGCCGACCCAGCCGTGCGCCAGCGAGCTCGGGAGGTGAT GGGCGAAGGATTGCAGCTGTGCCATGACCTTGGCGCTCCTGTGCTTCAGGTCGCGGGGTATTACTGCTACTACGAGCAGA TGAACGACCATGCCGAGCAGTGGTACACCGACCTCCTGCTCGATGCCGTCCCGATGGCTGCACGGCTGGGGGTCGTCATG GGCATCGAGAATGTTGACGGCACCGACGTCACCTCTATCCGGAAGGCGATGGAGTTTGTCAAGCTTGCCGACTCGCCCTA CCTGCAGGTGTACCCAGACCTTGGCAACATTGCCGAGCAACAGCTTGACGTCGTGACCGAACTCGAGGCCGGGCGGGGCC ACATGGTCGCGATCCACGTCAAGGATGTTAGGCCGGGCGAGCCTCGTCGGGTACCAATGGGGGAGGGCACCGTCGACTGG GACGAGTCCTTCGCTGTCCTTGCTGAGCAGGGTTGGCGCGGCCGAATGATGATCGAGATGTGGAACGACGACGCTCCCGA TTCCAACACGCGCAGTGCGTCAGCACGCCAGTTCATAGAGGAGCATCTTAGGACCGCTGGAATCCCGGTTCGCCGCGCCC TCTTTTGA
Upstream 100 bases:
>100_bases CGGTCGGCATCGTTATTGCCGGTCGCTCAATTGTCGCTGCTGATGATCCCAAAGCTGCCGCGCAACGACTGCGCTCCACC TTGGACGAGGTGTGGCCGCA
Downstream 100 bases:
>100_bases CCCTGGGCTGGGGGCTCGGCATGAATTCCGGGCCGCCCAGTTCTGCGCCTCTACAAATTTTCATTATTGTTCAAAGGAGA ACCCTTCATGCTTGAAAAGC
Product: L-xylulose 5-phosphate 3-epimerase
Products: NA
Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTESLTDGVTLGIYEKALVSNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGWDQRRRRMVRHCVEATETAIG GVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAPVLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVM GIENVDGTDVTSIRKAMEFVKLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF
Sequences:
>Translated_295_residues MTESLTDGVTLGIYEKALVSNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGWDQRRRRMVRHCVEATETAIG GVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAPVLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVM GIENVDGTDVTSIRKAMEFVKLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF >Mature_294_residues TESLTDGVTLGIYEKALVSNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGWDQRRRRMVRHCVEATETAIGG VCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAPVLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVMG IENVDGTDVTSIRKAMEFVKLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDWD ESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF
Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]
COG id: COG3623
COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HUMPI family [H]
Homologues:
Organism=Escherichia coli, GI1790641, Length=284, Percent_Identity=38.0281690140845, Blast_Score=215, Evalue=4e-57, Organism=Escherichia coli, GI87082294, Length=284, Percent_Identity=39.0845070422535, Blast_Score=191, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004560 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =5.1.3.22 [H]
Molecular weight: Translated: 33081; Mature: 32950
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESLTDGVTLGIYEKALVSNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGW CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCH DQRRRRMVRHCVEATETAIGGVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH VLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVMGIENVDGTDVTSIRKAMEFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF CHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TESLTDGVTLGIYEKALVSNPLATDDDWRRFLNQVPEAGFSFVDLSVDESEERMARLGW CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCH DQRRRRMVRHCVEATETAIGGVCLSVHRRIGPGSADPAVRQRAREVMGEGLQLCHDLGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH VLQVAGYYCYYEQMNDHAEQWYTDLLLDAVPMAARLGVVMGIENVDGTDVTSIRKAMEFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KLADSPYLQVYPDLGNIAEQQLDVVTELEAGRGHMVAIHVKDVRPGEPRRVPMGEGTVDW HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC DESFAVLAEQGWRGRMMIEMWNDDAPDSNTRSASARQFIEEHLRTAGIPVRRALF CHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA