Click here to switch to the map view.

The map label for this gene is lolD [H]

Identifier: 50842285

GI number: 50842285

Start: 878530

End: 878811

Strand: Reverse

Name: lolD [H]

Synonym: PPA0797

Alternate gene names: 50842285

Gene position: 878811-878530 (Counterclockwise)

Preceding gene: 50842286

Following gene: 50842284

Centisome position: 34.33

GC content: 59.57

Gene sequence:

>282_bases
ATGAACGAGAATAGCCCCGTGTTACGGGTGGAGAACCTCTCCAAGACCTTCGGTTCCAGAACCCTCTGGAAGGGCCATGA
CTTCCAGGCATCCGGCGGCGAGATGATCGCCCTACGTGGCCCTAGCGGTTGCGGAAAATCGACCCTATTGTCGACAATCG
GTCTCCTCATTCGGCCCGACAGCGGCCACATCGTGATCGACGGCACGGACATCCTTGCCATCCCGCGTCGACGGCACAAA
CGCGTCCGCCGTGAGACCATCGGCTACCTCTTTCAGGATTAG

Upstream 100 bases:

>100_bases
GCAGGCGTGGGAATCGCGACTCTGAGCATTCTCTCCTATGCAGGTTCTATCGAACATTGAGGACGCGCGAAGCATGACGA
CAATGAATGGGACGGCAACC

Downstream 100 bases:

>100_bases
GCTCTGCTCGAGAGCGCTACGGTACGCGAAAACCTAGACATCGCGGCGCGCCCAAGACCCTTACTACCCAAGCCCTCCTT
CGCATCCGCCTTGGAACGCG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEMIALRGPSGCGKSTLLSTIGLLIRPDSGHIVIDGTDILAIPRRRHK
RVRRETIGYLFQD

Sequences:

>Translated_93_residues
MNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEMIALRGPSGCGKSTLLSTIGLLIRPDSGHIVIDGTDILAIPRRRHK
RVRRETIGYLFQD
>Mature_93_residues
MNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEMIALRGPSGCGKSTLLSTIGLLIRPDSGHIVIDGTDILAIPRRRHK
RVRRETIGYLFQD

Specific function: Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-de

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1786698, Length=92, Percent_Identity=34.7826086956522, Blast_Score=65, Evalue=9e-13,
Organism=Escherichia coli, GI87081709, Length=85, Percent_Identity=35.2941176470588, Blast_Score=62, Evalue=8e-12,
Organism=Escherichia coli, GI1788225, Length=90, Percent_Identity=38.8888888888889, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015854
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 10317; Mature: 10317

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEMIALRGPSGCGKSTLLSTIGLLIRPD
CCCCCCEEEEECCHHHCCCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHCEEEECC
SGHIVIDGTDILAIPRRRHKRVRRETIGYLFQD
CCEEEECCCCEEECCCHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MNENSPVLRVENLSKTFGSRTLWKGHDFQASGGEMIALRGPSGCGKSTLLSTIGLLIRPD
CCCCCCEEEEECCHHHCCCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHCEEEECC
SGHIVIDGTDILAIPRRRHKRVRRETIGYLFQD
CCEEEECCCCEEECCCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]