Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842286

Identifier: 50842286

GI number: 50842286

Start: 878852

End: 879361

Strand: Reverse

Name: 50842286

Synonym: PPA0798

Alternate gene names: NA

Gene position: 879361-878852 (Counterclockwise)

Preceding gene: 50842287

Following gene: 50842285

Centisome position: 34.35

GC content: 59.61

Gene sequence:

>510_bases
GTGGAATTCTCCTACTCGATCCCAATTCCGAGTCCCGACGTGTCACGTCCAGTCCCTCGCTTGCCAGGGCAGTTGCCAAG
CATCTCACCTGCAGGGGCATCCACAGCCCAGAAAGCTTCCCAACAACGCCAACAGTTGCTGATCGCGGGCCTCGGCGCGC
TCGCCAGCTTACTCACTGTCGTGGCAACGTCGGTGAGCATCACCGGAATGTACAGCACTGTGCACCGGCAACGAAGCTTG
GTGCGCAAACTCCATGGGTGGTCGGGGCTCTACATGTTCCGACAAGTTGTCGCATGGGAAACCGGTTTGTGGGGCACCCT
GGCCATAGTTATTGCATGGCGATCGGTGACCTCATGGCAGGCTGGACGAACCGAATCCATCGCGGAGGGAAGGCGACCCC
ATGACCTGCTGTCCTGGGCTTACACCGCACCGTGGGCTTGGGCAGGCACGGCAGGCGTGGGAATCGCGACTCTGAGCATT
CTCTCCTATGCAGGTTCTATCGAACATTGA

Upstream 100 bases:

>100_bases
CCGAACAGGGTCTGTCGGCAACGATGACCGATCCCGTGATGATCCGCGTCCCCCTCAGGACTATTGTCAGGCGATGACCT
CACCACAGCGTTGACTACCG

Downstream 100 bases:

>100_bases
GGACGCGCGAAGCATGACGACAATGAATGGGACGGCAACCATGAACGAGAATAGCCCCGTGTTACGGGTGGAGAACCTCT
CCAAGACCTTCGGTTCCAGA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL
VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI
LSYAGSIEH

Sequences:

>Translated_169_residues
MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL
VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI
LSYAGSIEH
>Mature_169_residues
MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTVVATSVSITGMYSTVHRQRSL
VRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQAGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSI
LSYAGSIEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18212; Mature: 18212

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTV
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATSVSITGMYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
AGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH
CCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFSYSIPIPSPDVSRPVPRLPGQLPSISPAGASTAQKASQQRQQLLIAGLGALASLLTV
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATSVSITGMYSTVHRQRSLVRKLHGWSGLYMFRQVVAWETGLWGTLAIVIAWRSVTSWQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
AGRTESIAEGRRPHDLLSWAYTAPWAWAGTAGVGIATLSILSYAGSIEH
CCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA