| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842234
Identifier: 50842234
GI number: 50842234
Start: 820553
End: 821695
Strand: Reverse
Name: 50842234
Synonym: PPA0747
Alternate gene names: NA
Gene position: 821695-820553 (Counterclockwise)
Preceding gene: 50842235
Following gene: 50842233
Centisome position: 32.09
GC content: 62.47
Gene sequence:
>1143_bases GTGCTCACGATCATCGGCCTCAGCATTGACCAGCGTGGCCTGGCGAGAATTGGGTTTCTCCTTATCCTGCTGCCGCTGAT AGCCATTAGTGTCGTCGCATGGTTTCGACCGCGCGTGCAGACCGCGCGGAGTCTCGCTCCAATGCGGATAGCGTTAGGCT CCCAAGCCTGCGAAACCGTCACGGTAGAGCGTCGTGGCGGACTACCACTTGGAGCAGCCCGATTCACCGATACCATCCCC GCGCCGCTAGGCCAGTCACGATGGTCGACGGCCACCATCCAGACCCCAGTCATACCTACTACACGTGGTCGATTCGTGAT CGGCCCCGTCATGATGCGCACCGTCGACCCGTTTGGCATGGCCCGCCATCACACCGATCTCGGTCAGGTTGCCGAAGTCA TTGTCACGCCAAGGATCGTCGATTTGGGCGCCTCCGGGGAGCTCGGGGGTCAGGGATTCGACACAAGGTCCTCAGCGATC CATGCCGGACGACGTGGTCCCGACGATGCCATGGTGCGCGATTGGCACACCGGAGACTCGGTGCGACGCATTCACTGGCG CTCCACCGCTCACCGCGGGGACCTCATGGTCCGATGCGAGGAGCAGGCCTGGAACCCATCCGTCGTCATCGTGTTGGATT CTCGGGCTCGGCGTCACGCTGGAACTGGCCCCGACGCATCCTTTGAATGGGCCGTCAACGCGGTGGCATCCATCTCGACG CGTCTGGCCTCCGACGGATACGTCACTCACGTGTGTGACTCATCCGGCACGCTCAAGGGCGACATTCTCGACGCCCTCGT CGACGAACCGCTGCGTCCCGACACCGCCCTGACCAAGGCTATCGAGTCATGCCAGGGAATTGACGGCCCGGCGATCGCCA TCCTCGGCCGGTTGGAGACGACCGATATTGATCCTCTCGTGGACTTGAGACGGGACCGGGTCGCTGGCCTTGCCCTTGTC CTAGATTCCGATACCTTCACCGCTCGACGATTCCGCAGCCCCCTTGAGCAGGCCGAGGAGCACGAGCGTGCCGTCGCAGA GTTGGATGATGCTGGGTGGGCAGTCGTTCCCGTCGATTCTCGCACCTCTATCGATTCGGCATGGCAGAACTTGCTGCAGA CCGCAAGGACGGCAGCTTTATGA
Upstream 100 bases:
>100_bases GGGCGCATCAAGACCGATGAGCGCCGCCTCAACGTCCAGCGCCCCTCGCCGTCAGGGACTGCTCACACTACGAGGACGCA CGGTCGGGATCGTGGGGATC
Downstream 100 bases:
>100_bases CAAACCCACGTCGTGCCGCTCAGCCTGTCACCCAGCTGTCCGAACATCTCGATCTGACCAAGGCATCTGAGTACCCCGGC CTTCTGGCTATTCACCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLTIIGLSIDQRGLARIGFLLILLPLIAISVVAWFRPRVQTARSLAPMRIALGSQACETVTVERRGGLPLGAARFTDTIP APLGQSRWSTATIQTPVIPTTRGRFVIGPVMMRTVDPFGMARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAI HAGRRGPDDAMVRDWHTGDSVRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHAGTGPDASFEWAVNAVASIST RLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILGRLETTDIDPLVDLRRDRVAGLALV LDSDTFTARRFRSPLEQAEEHERAVAELDDAGWAVVPVDSRTSIDSAWQNLLQTARTAAL
Sequences:
>Translated_380_residues MLTIIGLSIDQRGLARIGFLLILLPLIAISVVAWFRPRVQTARSLAPMRIALGSQACETVTVERRGGLPLGAARFTDTIP APLGQSRWSTATIQTPVIPTTRGRFVIGPVMMRTVDPFGMARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAI HAGRRGPDDAMVRDWHTGDSVRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHAGTGPDASFEWAVNAVASIST RLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILGRLETTDIDPLVDLRRDRVAGLALV LDSDTFTARRFRSPLEQAEEHERAVAELDDAGWAVVPVDSRTSIDSAWQNLLQTARTAAL >Mature_380_residues MLTIIGLSIDQRGLARIGFLLILLPLIAISVVAWFRPRVQTARSLAPMRIALGSQACETVTVERRGGLPLGAARFTDTIP APLGQSRWSTATIQTPVIPTTRGRFVIGPVMMRTVDPFGMARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAI HAGRRGPDDAMVRDWHTGDSVRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHAGTGPDASFEWAVNAVASIST RLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILGRLETTDIDPLVDLRRDRVAGLALV LDSDTFTARRFRSPLEQAEEHERAVAELDDAGWAVVPVDSRTSIDSAWQNLLQTARTAAL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41131; Mature: 41131
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIIGLSIDQRGLARIGFLLILLPLIAISVVAWFRPRVQTARSLAPMRIALGSQACETV CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHEE TVERRGGLPLGAARFTDTIPAPLGQSRWSTATIQTPVIPTTRGRFVIGPVMMRTVDPFGM EEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECHHHHHHCCCHHH ARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAIHAGRRGPDDAMVRDWHTGDS HHHCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCHHEEECCCCCC VRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHAGTGPDASFEWAVNAVASIST EEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHH RLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILGRLET HHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCC TDIDPLVDLRRDRVAGLALVLDSDTFTARRFRSPLEQAEEHERAVAELDDAGWAVVPVDS CCCCHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC RTSIDSAWQNLLQTARTAAL CCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTIIGLSIDQRGLARIGFLLILLPLIAISVVAWFRPRVQTARSLAPMRIALGSQACETV CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHEE TVERRGGLPLGAARFTDTIPAPLGQSRWSTATIQTPVIPTTRGRFVIGPVMMRTVDPFGM EEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECHHHHHHCCCHHH ARHHTDLGQVAEVIVTPRIVDLGASGELGGQGFDTRSSAIHAGRRGPDDAMVRDWHTGDS HHHCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCHHEEECCCCCC VRRIHWRSTAHRGDLMVRCEEQAWNPSVVIVLDSRARRHAGTGPDASFEWAVNAVASIST EEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHH RLASDGYVTHVCDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILGRLET HHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCC TDIDPLVDLRRDRVAGLALVLDSDTFTARRFRSPLEQAEEHERAVAELDDAGWAVVPVDS CCCCHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC RTSIDSAWQNLLQTARTAAL CCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA