| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yebA [H]
Identifier: 50842233
GI number: 50842233
Start: 818343
End: 820556
Strand: Reverse
Name: yebA [H]
Synonym: PPA0746
Alternate gene names: 50842233
Gene position: 820556-818343 (Counterclockwise)
Preceding gene: 50842234
Following gene: 50842232
Centisome position: 32.05
GC content: 57.72
Gene sequence:
>2214_bases ATGACAAACCCACGTCGTGCCGCTCAGCCTGTCACCCAGCTGTCCGAACATCTCGATCTGACCAAGGCATCTGAGTACCC CGGCCTTCTGGCTATTCACCTCGCGGTAGCCCTGGCCATGATGTTGGCCACCTTTTCGCTGATAGGGCTCACTACCGATC CGTCTTTTTGGATCGGTCCGACTGCCGTCATCGTCTTCCTCGAAGTCGTCGGCCTGCTGTGCCGACACCACCACTGGGAC CACGCCGAGGTACAAGGCGTGCAAGCCATTCTCGTCGTCGTCATCGTCGTGATGATGGGAGGCATCAGTGCATCGGCGGT TGGTTCCTCCGGCTCATTCCCGGTTAATGCCCTTCATCTGTATCGCGACACCCTCACTCTGATCCAGACGACCGATGGAC ATCTTCCCCCGTCAATCGGGGTTATCTGGTTGACAACGACCGTGGTGGCGGTTCTGACTGTTCTGGCAGACCTGCTAACC ATTACTCTCGAAAGCCCTGGGTGGTCTCTCGCTCCGCTGCTAGTTATCCATCTTGCGGCGGTTCTCATCGTCAGACACGA CACGCCCTGGTGGAGTTTCGCCTTGGTCGCGGCGAGCTGGCTCATCATCCTCACCGTCGATCATGCGCTTCGAGGAGGTG GCCCTCTGACCTGGTTGGCCGCGGCTATATTCAGTATTATCGCCATCACGATCGCTACAGTGTTCGCCGCGATCGCACCC GTCTGGGGACATCTTGACTTCTCTCGCCCAGCAGCGGCCCCGTCGAGTCCGGTACGGATGAGTGATCCGACCATCGAACT GCGTCGCAATCTCCATAACACATCGACGGCATCAGTCATCACCTACACCACTAATAGCCCTGACGGTGAATACCTGCGCA TGACCTCCCTATCGAAGGTGACTGATCGAGGGTGGGGCCTCATCCCAGTTGATCTAGAACACTCTGCCCCTGAATCTGTA CCGGGATTGTTTGGCCCGTCACGAACTCGTACGGTCGATATCAATATCACTGGGTTTTCTTCACAGTATTTACCCGCTCC CTATGGACCAATTGCTGCGGACGTCGATCAGACCTGGGCGTGGGACCCACAGGATCTGACGATTGTCTCAACCTCTGCTG ATCACGACCATGCAACCTCCGATATGCAGTACAGCATTTCGGCGCAGGAGCCCGACCCCGATCCAGTAACCTTCGATAAC GCGAAGGCCGGCACCCCAAATAACTCGGTGTACACCGAAGTCCCTGCTAACGTTCCATCCAGCATAAGGGACTTAACTAG CCGAATTATCAAGGGGAAATCTACCCCCGTAACCAAGGCCATCGCGATTCAAAACTGGCTTCGTGACAGCGCTCGATTCC ATTACGACATCAACGCACCCGAAGGTGACGGCTATCAAGTACTGGAAAACTTCTTGCTGCGCACCCACCGTGGTTATTGC ATCCATTTCGCGGCGTCAATGGCACTTATGGCACGACTTGAAGGTATTCCGTCACGCGTATCCGTGGGGTTCCTTCCCGG CGATCATGCAAGAGGCACCTGGAAGATACGCGCCAACCAGATGCACGCTTGGCCCGAGTTGTACTTCCAGGACTACGGAT GGGTTAGGTTCGAGCCGACCGCAGCGGTGGCACCAGCTCCCGCCTGGACCGACAAGGAAACCACTATTCCTTCCCCCTCC TCCACCCCATCGTCATCCCCGACTCCTTCGACACAGACCTCCACCTCATCGCCTGAGCCATCCCCGGCAGCTGCACATAC TTCGACACCCACCAGCAGCCCCGCACCTATCAGTACCGCCGACCATGAAGGCTTCAATTGGGCACCTCTCAGTGCAGTCC TCGTCATTCTCGTCATACTCGCGCTGCCAATGCTCATTCGCATGCTCATCTCACGCCGCAGGATCACCCGTGGTTCGATA GCCGGCATTTGGCGGGAAATCCGCGACCTGTGGATCGATCACGGTTTGGCCTGGCCTGACGGTACCCCGCGTCGTCAAGC CGCGGCCTTAGTCACCGACATGGATCCGGACACCTCCGCTGCGGTCAAGAAGCTGGCCCTGGCAGAGGAGATGGACCGCT GGTCTAGCAAGGATGGTCATGACAACTCTCTTGCCGACGATCTCGGGGCAGTCAAGGCCTGGTTAGCACGAACCCCCACC CCCAGGCCACACTGGCTGGCGACCTGGTTACCGACATCCCTTGTCAAAAAGTGA
Upstream 100 bases:
>100_bases AGTTGGATGATGCTGGGTGGGCAGTCGTTCCCGTCGATTCTCGCACCTCTATCGATTCGGCATGGCAGAACTTGCTGCAG ACCGCAAGGACGGCAGCTTT
Downstream 100 bases:
>100_bases AAGTCACCGCGACTGACGACGGAGTGTTACCTCGACTGACGTCGACGCCAGCGCTCTTCCATTCGAGCGGTGAAGGATTC GGAATGGGGCTCGCGTTGCC
Product: putative protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MTNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSLIGLTTDPSFWIGPTAVIVFLEVVGLLCRHHHWD HAEVQGVQAILVVVIVVMMGGISASAVGSSGSFPVNALHLYRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLT ITLESPGWSLAPLLVIHLAAVLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSIIAITIATVFAAIAP VWGHLDFSRPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSPDGEYLRMTSLSKVTDRGWGLIPVDLEHSAPESV PGLFGPSRTRTVDINITGFSSQYLPAPYGPIAADVDQTWAWDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDN AKAGTPNNSVYTEVPANVPSSIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQVLENFLLRTHRGYC IHFAASMALMARLEGIPSRVSVGFLPGDHARGTWKIRANQMHAWPELYFQDYGWVRFEPTAAVAPAPAWTDKETTIPSPS STPSSSPTPSTQTSTSSPEPSPAAAHTSTPTSSPAPISTADHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSI AGIWREIRDLWIDHGLAWPDGTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLADDLGAVKAWLARTPT PRPHWLATWLPTSLVKK
Sequences:
>Translated_737_residues MTNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSLIGLTTDPSFWIGPTAVIVFLEVVGLLCRHHHWD HAEVQGVQAILVVVIVVMMGGISASAVGSSGSFPVNALHLYRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLT ITLESPGWSLAPLLVIHLAAVLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSIIAITIATVFAAIAP VWGHLDFSRPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSPDGEYLRMTSLSKVTDRGWGLIPVDLEHSAPESV PGLFGPSRTRTVDINITGFSSQYLPAPYGPIAADVDQTWAWDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDN AKAGTPNNSVYTEVPANVPSSIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQVLENFLLRTHRGYC IHFAASMALMARLEGIPSRVSVGFLPGDHARGTWKIRANQMHAWPELYFQDYGWVRFEPTAAVAPAPAWTDKETTIPSPS STPSSSPTPSTQTSTSSPEPSPAAAHTSTPTSSPAPISTADHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSI AGIWREIRDLWIDHGLAWPDGTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLADDLGAVKAWLARTPT PRPHWLATWLPTSLVKK >Mature_736_residues TNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSLIGLTTDPSFWIGPTAVIVFLEVVGLLCRHHHWDH AEVQGVQAILVVVIVVMMGGISASAVGSSGSFPVNALHLYRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLTI TLESPGWSLAPLLVIHLAAVLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSIIAITIATVFAAIAPV WGHLDFSRPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSPDGEYLRMTSLSKVTDRGWGLIPVDLEHSAPESVP GLFGPSRTRTVDINITGFSSQYLPAPYGPIAADVDQTWAWDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDNA KAGTPNNSVYTEVPANVPSSIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQVLENFLLRTHRGYCI HFAASMALMARLEGIPSRVSVGFLPGDHARGTWKIRANQMHAWPELYFQDYGWVRFEPTAAVAPAPAWTDKETTIPSPSS TPSSSPTPSTQTSTSSPEPSPAAAHTSTPTSSPAPISTADHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSIA GIWREIRDLWIDHGLAWPDGTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLADDLGAVKAWLARTPTP RPHWLATWLPTSLVKK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 79883; Mature: 79752
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSLIGLTTDPSFWIGP CCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEECH TAVIVFLEVVGLLCRHHHWDHAEVQGVQAILVVVIVVMMGGISASAVGSSGSFPVNALHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH YRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLTITLESPGWSLAPLLVIHLAA HHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH VLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSIIAITIATVFAAIAP HHHHCCCCCHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VWGHLDFSRPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSPDGEYLRMTSLSKV HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEHHHHHH TDRGWGLIPVDLEHSAPESVPGLFGPSRTRTVDINITGFSSQYLPAPYGPIAADVDQTWA HCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC WDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDNAKAGTPNNSVYTEVPANVPS CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEEECCCCCCH SIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQVLENFLLRTHRGYC HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCE IHFAASMALMARLEGIPSRVSVGFLPGDHARGTWKIRANQMHAWPELYFQDYGWVRFEPT EHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCC AAVAPAPAWTDKETTIPSPSSTPSSSPTPSTQTSTSSPEPSPAAAHTSTPTSSPAPISTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSIAGIWREIRDLWIDHGLAWPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLADDLGAVKAWLARTPT CCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PRPHWLATWLPTSLVKK CCCCEEHHHCCHHHHCC >Mature Secondary Structure TNPRRAAQPVTQLSEHLDLTKASEYPGLLAIHLAVALAMMLATFSLIGLTTDPSFWIGP CCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEECH TAVIVFLEVVGLLCRHHHWDHAEVQGVQAILVVVIVVMMGGISASAVGSSGSFPVNALHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH YRDTLTLIQTTDGHLPPSIGVIWLTTTVVAVLTVLADLLTITLESPGWSLAPLLVIHLAA HHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH VLIVRHDTPWWSFALVAASWLIILTVDHALRGGGPLTWLAAAIFSIIAITIATVFAAIAP HHHHCCCCCHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VWGHLDFSRPAAAPSSPVRMSDPTIELRRNLHNTSTASVITYTTNSPDGEYLRMTSLSKV HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEHHHHHH TDRGWGLIPVDLEHSAPESVPGLFGPSRTRTVDINITGFSSQYLPAPYGPIAADVDQTWA HCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC WDPQDLTIVSTSADHDHATSDMQYSISAQEPDPDPVTFDNAKAGTPNNSVYTEVPANVPS CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEEECCCCCCH SIRDLTSRIIKGKSTPVTKAIAIQNWLRDSARFHYDINAPEGDGYQVLENFLLRTHRGYC HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCE IHFAASMALMARLEGIPSRVSVGFLPGDHARGTWKIRANQMHAWPELYFQDYGWVRFEPT EHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCC AAVAPAPAWTDKETTIPSPSSTPSSSPTPSTQTSTSSPEPSPAAAHTSTPTSSPAPISTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHEGFNWAPLSAVLVILVILALPMLIRMLISRRRITRGSIAGIWREIRDLWIDHGLAWPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GTPRRQAAALVTDMDPDTSAAVKKLALAEEMDRWSSKDGHDNSLADDLGAVKAWLARTPT CCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PRPHWLATWLPTSLVKK CCCCEEHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]