Click here to switch to the map view.

The map label for this gene is yadR [C]

Identifier: 50842188

GI number: 50842188

Start: 771105

End: 771458

Strand: Direct

Name: yadR [C]

Synonym: PPA0700

Alternate gene names: 50842188

Gene position: 771105-771458 (Clockwise)

Preceding gene: 50842187

Following gene: 50842189

Centisome position: 30.12

GC content: 60.17

Gene sequence:

>354_bases
ATGACCGACGCCCTTACCCCTCCCGCCACTGACGGAATCATCCTTACCGACGCGGCTGCCGCGAAGGTGAAGTCGCTGCT
CGATCAAGAGGGTCGTGACGACCTCGCGTTGCGTCTGGCTGTGCAGCCTGGCGGTTGCTCGGGGCTGCGGTATCAGCTGT
TCTTCGACGAGCGTCACCTCGAGGGCGACGTTGTAAAGACCTACGGCGGGGTCGATGTGGTCACTGACCGTATGAGCGCT
CCATACCTAGCTGGCGCCACGATTGACTTCATGGACACCATCGAAAAGCAGGGGTTCACTATCGACAACCCTAACGCGAC
TAGCACCTGCGCTTGTGGGGACTCTTTCCACTGA

Upstream 100 bases:

>100_bases
CAGTGGATATTGCGACGGGACGACACACCCGCCCGATCCATCAAGATCGACCACCCGGGTCATTTCCCGGGATCGTCCAT
CACACGTTCTTGGAGCCCAT

Downstream 100 bases:

>100_bases
GCTGGTTCTGAGGATCGGGAACTCTTCCCGAGCAGGCTCGTTGGAGTCATTAAGGCGTTTCGTCAGTCCTACTGGGCGGA
CGAAGCGCCTTATTTTCGCT

Product: HesB protein, putative for nitrogen fixation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHLEGDVVKTYGGVDVVTDRMSA
PYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH

Sequences:

>Translated_117_residues
MTDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHLEGDVVKTYGGVDVVTDRMSA
PYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH
>Mature_116_residues
TDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHLEGDVVKTYGGVDVVTDRMSAP
YLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=115, Percent_Identity=38.2608695652174, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=46.6019417475728, Blast_Score=97, Evalue=2e-22,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=40.9523809523809, Blast_Score=80, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71998452, Length=107, Percent_Identity=37.3831775700935, Blast_Score=75, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24642263, Length=110, Percent_Identity=33.6363636363636, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12472; Mature: 12341

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHL
CCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
EGDVVKTYGGVDVVTDRMSAPYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH
CCCEEEECCCEEEEECCCCCCEECCCEEHHHHHHHHCCCEECCCCCCCEECCCCCCC
>Mature Secondary Structure 
TDALTPPATDGIILTDAAAAKVKSLLDQEGRDDLALRLAVQPGGCSGLRYQLFFDERHL
CCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
EGDVVKTYGGVDVVTDRMSAPYLAGATIDFMDTIEKQGFTIDNPNATSTCACGDSFH
CCCEEEECCCEEEEECCCCCCEECCCEEHHHHHHHHCCCEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]