| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842179
Identifier: 50842179
GI number: 50842179
Start: 762099
End: 764036
Strand: Reverse
Name: 50842179
Synonym: PPA0691
Alternate gene names: NA
Gene position: 764036-762099 (Counterclockwise)
Preceding gene: 50842180
Following gene: 50842178
Centisome position: 29.84
GC content: 60.27
Gene sequence:
>1938_bases GTGACGTATCCCAGCCACGCCCGCACCACTGGACCGCTGTTAGCGGCCACAGGTGTCGCCATGGCCATCGTCGCCGCGGT GATTGGACGACTCCGTCCCCTGGAACCTCGTCTGCTGGGCAGGGAGAATCCAGACGTCCTCACTAGCGTCCTGCATGCCG TCGTCGAAACCCTGTTCTGGACAGCCCTGGTGTGGACGTTAACAGAGCTTGTTCGCGCCACCTTGTGCTCACCGCATCGG GATGTCGTCGATTCCACCCGCACCCGCGGACGCCGGGCATGGTTAGCCGCACAGATGTGGGTTGTACTGGCCCTGCTCAT GATCCCGCTGGAATCCGCTGATTCCGCCGGTTTGACCTTCGAGCAGGCCTTCCTCGATCTCCCGACCTACATCACCTCAA CCCCATCGGTAGCGGCTTGGCTCGTCGTCGCAGTCTTGGGGCTGCTGGTCGGCCTGCTTGCTCTGCTGAGCACCCATCTC GGCGGCCTCGTAGTGGCAAGCTTACTGACGGTCCTCGCCGCATTGCCGGTTCCCGTCACCGGGGCAATTTCGGTGGGCCT TAACCACGATTTCGCCACCGACTCCGGAGCTCTGGCCACCGTCGGCATGACAGTCGCCGCTGCTTGCGTTCTGGTCGAGG TCCTTGACGGCCCCCGCCCTGCCCTCACCGACCGTCTTATCTGGAAGCAACGCATCGGCGCCGCCGTAACCCTTGCTGGA AGCATTGTTGTCACCTGGCAAGGTCAGGCTGAGCGTTCCTGGGGCTCTGATCGATGGGGCGTGGCCCGCCTCATCGTGCT CGTCGCTACAGTTATCTGGGTCGTCATCACCTGGCTGCCACGTACCAGGATGCTGAGCTGGCTCGGGGTGACGATGGTGG CGGTCGTGCTGATCATGACGGGAGCAGCAAATCAGCTCGTGCCACCGCGCTACCTCATTGGTCAAACCCCGGCTGTCAAT TACCTCGGCTATGAACTACCGCCGGCACCCACAGCCGCCATCCTGCTGGCTCCCGGCCGTCCCAACATCGGTTTCTGGAC TCTATCAGTCCTCGGAATCGTTGGCTATTACGTCGCTGTTAGGACCCTCAAGCGTCGTGGCGAAGCCTGGTCTGGGGCAC GTATAGGCTCATGGATCGGGGCTTGGGCCGTGGTGATATATCTTGCTAGCACCGGGCTGTGGGAATACTCCTCAATGCAG TTCAGCTGGCACATGCTCGTTCATATGACCTTCAACATGCTGGTTCCGGCCCTACTGGTGCTGGGAGCGCCAATCACCCT CCTAAGACGGGTATTGCGTTCCGGAGACCAGATCAACGATGGTTTCAACGGACCCCATGACTGCCTCATGGCGACGCTGG AATGGCGTCCCACAAAGATCCTATTCGGCCCCTTCGCCGCATGGATCGTCTTTATTGCCAGCTTCTACGTCGTCTATTTC ACCCCGATATTCGGCTACCTCATGCGCTACCATTGGGGGCACCAGTGGATGCTGCTGCATTTCCTCGTGGTCGGGTTCAT GCTGTTTGAATACGTCATTGGCTTGGACGATCTACCAGTGTCACTGCCCCACATCGGCCGATTGGGGTTTGTCATTACAG CAATGCCTTTCCACTCGTTCTTCGCCGTCATCACGATGAATGCCCACCAGATCATCGGCAAGGATTTTTACGAGGCACTA TCTATTCCGTGGGTTCCCAATCTGCATGACGACCAGAACGTCGGTGGCCAGATCACCTGGGCCACCGGCGAGATCCCGAT GGCGCTGGTCCTCATCGCGCTGTGCGTGCAGTGGTTCATCTCGGACCGTCGCGACCAGCGGCGGGTCGATGCTTCTGAGG ACGCCGACCTTGATGAGTCCCTGGCCGCCTACAACGACATGCTCGCCCGAATGGCTGGTCAGGAGATCAAGCCGCACGAT CCAGGGACCAAGTCATGA
Upstream 100 bases:
>100_bases ATTCCGCGTCGGGAACACCCAGCGTTCCTGCATCCCATGCCATGATCCTGTCCGTTCCCTCGGCTACAGTTCCCTCTACC CTGCCCCAAAGGAGATGTCG
Downstream 100 bases:
>100_bases GCACGGCCACGATGAGTCCCCCAGACGAGGAGCAAACCGTCCTACATCCGCCGGTGCAGTTGCAGATCAGCGGGATGACC TGCGCTGCGTGCGCCACAAC
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MTYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFWTALVWTLTELVRATLCSPHR DVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTFEQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHL GGLVVASLLTVLAALPVPVTGAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAG SIVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIMTGAANQLVPPRYLIGQTPAVN YLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAVRTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQ FSWHMLVHMTFNMLVPALLVLGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIASFYVVYF TPIFGYLMRYHWGHQWMLLHFLVVGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSFFAVITMNAHQIIGKDFYEAL SIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFISDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHD PGTKS
Sequences:
>Translated_645_residues MTYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFWTALVWTLTELVRATLCSPHR DVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTFEQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHL GGLVVASLLTVLAALPVPVTGAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAG SIVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIMTGAANQLVPPRYLIGQTPAVN YLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAVRTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQ FSWHMLVHMTFNMLVPALLVLGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIASFYVVYF TPIFGYLMRYHWGHQWMLLHFLVVGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSFFAVITMNAHQIIGKDFYEAL SIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFISDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHD PGTKS >Mature_644_residues TYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFWTALVWTLTELVRATLCSPHRD VVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTFEQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHLG GLVVASLLTVLAALPVPVTGAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAGS IVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIMTGAANQLVPPRYLIGQTPAVNY LGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAVRTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQF SWHMLVHMTFNMLVPALLVLGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIASFYVVYFT PIFGYLMRYHWGHQWMLLHFLVVGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSFFAVITMNAHQIIGKDFYEALS IPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFISDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHDP GTKS
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1998 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 70664; Mature: 70533
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH TALVWTLTELVRATLCSPHRDVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHLGGLVVASLLTVLAALPVPVT HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAG CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHEEEEC SIVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIMT EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GAANQLVPPRYLIGQTPAVNYLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH RTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQFSWHMLVHMTFNMLVPALLV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIASFYVVYF HCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH TPIFGYLMRYHWGHQWMLLHFLVVGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH FAVITMNAHQIIGKDFYEALSIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFI HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH SDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHDPGTKS HCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TYPSHARTTGPLLAATGVAMAIVAAVIGRLRPLEPRLLGRENPDVLTSVLHAVVETLFW CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH TALVWTLTELVRATLCSPHRDVVDSTRTRGRRAWLAAQMWVVLALLMIPLESADSAGLTF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH EQAFLDLPTYITSTPSVAAWLVVAVLGLLVGLLALLSTHLGGLVVASLLTVLAALPVPVT HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GAISVGLNHDFATDSGALATVGMTVAAACVLVEVLDGPRPALTDRLIWKQRIGAAVTLAG CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHEEEEC SIVVTWQGQAERSWGSDRWGVARLIVLVATVIWVVITWLPRTRMLSWLGVTMVAVVLIMT EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GAANQLVPPRYLIGQTPAVNYLGYELPPAPTAAILLAPGRPNIGFWTLSVLGIVGYYVAV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH RTLKRRGEAWSGARIGSWIGAWAVVIYLASTGLWEYSSMQFSWHMLVHMTFNMLVPALLV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGAPITLLRRVLRSGDQINDGFNGPHDCLMATLEWRPTKILFGPFAAWIVFIASFYVVYF HCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH TPIFGYLMRYHWGHQWMLLHFLVVGFMLFEYVIGLDDLPVSLPHIGRLGFVITAMPFHSF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH FAVITMNAHQIIGKDFYEALSIPWVPNLHDDQNVGGQITWATGEIPMALVLIALCVQWFI HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH SDRRDQRRVDASEDADLDESLAAYNDMLARMAGQEIKPHDPGTKS HCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]