| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842084
Identifier: 50842084
GI number: 50842084
Start: 662715
End: 664187
Strand: Direct
Name: 50842084
Synonym: PPA0598
Alternate gene names: NA
Gene position: 662715-664187 (Clockwise)
Preceding gene: 50842083
Following gene: 50842090
Centisome position: 25.88
GC content: 60.83
Gene sequence:
>1473_bases ATGGCACTACGCCGTACGTTGACCTTGATGCTCTGTGCGATCACCGGCGCATCACTTGTCGCGACCGCAGTCCCCAGCAG CGCCGCTCCTGGCTTCACTATCTCACCGCTGCGCACTTCCGATTCTATACAGTCCACCAGCGGATTCGTCGTTCATCTTA AGGACCGTTCGGCCTCTGCCCAGCGCGTTAGGACCGCTCATGCCGCCTCCGCGATGCAGGCAACCAGCACGTCTCTGCGA GGGTTAGTGGATCGTGCTGCGAAGGTGCGAGGTGCCCACGTCACTGAGTCATTGGCGCGTGCCAACAACTCCATGTCGGT TCAGGTTTCTCAAGGGCTCAATGCTACGGCGGCTAAGGCTTTTGCATCTGAGATCGAACGCAACCCGGAGGTGGAATCCG TCGAGCCCGTCTTGCATATGACGATTAATGAGAACACCGGTGTCCATCCTGCTGCAGTGTCGTCGGCCCCGAACGACCAG TATTGGAACCGTCAATGGGGCCTGAATTCTGAGAACGGGATTGACGCTCCCGGCGCATGGGCAACCAACACAGGATCCGG AGTGACCGTGGCCGTCATCGACTCCGGCATCACCAAGCACCCGGATCTGGATGGCAAGGTCCTACCTGGCTACGACTTCA TCTCTGATCGTTATGCCGCCGGCGATGGTAACGGTCGCGATTCGGATCCCTCCGATGAGGGCGATTGGACTCGTGCGGGG GCCTGCACCCGGCGTGACGTGCCGTCGTCGTGGCATGGGACCCACGTGGCGGGCATTATTGGCGCTGCGACCAACAATGC TAGGGGTGTCGCAGGAGCCGCCCCTGGCGCCAAGATCCTGCCGGTTCGAGCGCTAGGTCATTGCGGTGGGACCGACGTCG ATATTGCCGACGGTATTACGTGGGCCTCTGGTGGCGAGGTTCCGGGTGTTCCCACTAACCACAACCCCGCTAAGGTCATT AATCTGAGCCTCGGCGGTCCGTCTAACTACTGCCCGATCACGTATCAGCGAGCCATTGATGCGGCCGTCTCTCGCGGATC CACCGTCGTTGTGGCAGCCGGTAACGAGGCGATGGACGTCCGTAAGTCGACACCCGGCAACTGCCGCAATGTGGTCGTTG TCGGAGCTACCGGTGAGACTGGTGCCCAGTCGTACTTCTCGAATTACGGTTCGACCGTTGACGTGTCCGCTCCTGGCGGT GACGACCGCACCGGTGACATGATCCTATCCACCCTGAATAACGGCGAAACGACTCCTGCGGCCCCGACCTACGGCTACAT GGAGGGCACCTCCCAGGCTGCCCCGCACGTCTCCGCCGTTGTTGCTCTCATGATCGCGGCCAACCCGAACCTCACCCCCG CGAGGATCAAGGAAATCCTCAAACAGTCGGTGAACCCGGCTAAATGCAAGACCGGTTGCGGTACGGGCATTGTTGATGCC CGCAAGGCGGTCAAGGCTGCAAAATCGGCCTGA
Upstream 100 bases:
>100_bases GTGCGAGACATTTATAGGCTGTGTCAGGCTATGTCTAAATAAATGACCCACTGTCATCCTAGGTTCGTTTCACCTTCAGC AAACTGAGAGGAATGGACAT
Downstream 100 bases:
>100_bases TTGCTAGGATTCTGTCAATGATGAGTGACCTGGGCCATATGGTTCAGGCCACTCGTCACGTTGATAGGTATGCGCGGTAT CACCAGGGGACGTCAGGCTC
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASAQRVRTAHAASAMQATSTSLR GLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKAFASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQ YWNRQWGLNSENGIDAPGAWATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGITWASGGEVPGVPTNHNPAKVI NLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDVRKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGG DDRTGDMILSTLNNGETTPAAPTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA RKAVKAAKSA
Sequences:
>Translated_490_residues MALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASAQRVRTAHAASAMQATSTSLR GLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKAFASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQ YWNRQWGLNSENGIDAPGAWATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGITWASGGEVPGVPTNHNPAKVI NLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDVRKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGG DDRTGDMILSTLNNGETTPAAPTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA RKAVKAAKSA >Mature_489_residues ALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASAQRVRTAHAASAMQATSTSLRG LVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKAFASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQY WNRQWGLNSENGIDAPGAWATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAGA CTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGITWASGGEVPGVPTNHNPAKVIN LSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDVRKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGGD DRTGDMILSTLNNGETTPAAPTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDAR KAVKAAKSA
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505577, Length=368, Percent_Identity=26.9021739130435, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI20336180, Length=368, Percent_Identity=26.9021739130435, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI20336182, Length=368, Percent_Identity=26.9021739130435, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27894285, Length=368, Percent_Identity=26.6304347826087, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4505579, Length=366, Percent_Identity=25.1366120218579, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI20336184, Length=368, Percent_Identity=26.9021739130435, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI20336190, Length=369, Percent_Identity=26.5582655826558, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI20336188, Length=368, Percent_Identity=26.6304347826087, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI20336186, Length=336, Percent_Identity=26.7857142857143, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71983555, Length=373, Percent_Identity=27.8820375335121, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25141268, Length=373, Percent_Identity=27.6139410187668, Blast_Score=79, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6324576, Length=321, Percent_Identity=28.9719626168224, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6320775, Length=295, Percent_Identity=27.4576271186441, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319893, Length=285, Percent_Identity=28.0701754385965, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24650056, Length=367, Percent_Identity=25.0681198910082, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24650058, Length=367, Percent_Identity=25.0681198910082, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650060, Length=367, Percent_Identity=25.0681198910082, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45553513, Length=367, Percent_Identity=25.0681198910082, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45553515, Length=367, Percent_Identity=25.0681198910082, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864552, Length=367, Percent_Identity=25.0681198910082, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 50175; Mature: 50044
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASA CCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCHH QRVRTAHAASAMQATSTSLRGLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH FASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQYWNRQWGLNSENGIDAPGAW HHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG CCCCCCCEEEEEECCCCCCCCCCCCEEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCC ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGIT CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCEE WASGGEVPGVPTNHNPAKVINLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDV ECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH RKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGGDDRTGDMILSTLNNGETTPA CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHEEECCCCCCCCC APTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHH RKAVKAAKSA HHHHHHHHCC >Mature Secondary Structure ALRRTLTLMLCAITGASLVATAVPSSAAPGFTISPLRTSDSIQSTSGFVVHLKDRSASA CHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCHH QRVRTAHAASAMQATSTSLRGLVDRAAKVRGAHVTESLARANNSMSVQVSQGLNATAAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH FASEIERNPEVESVEPVLHMTINENTGVHPAAVSSAPNDQYWNRQWGLNSENGIDAPGAW HHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATNTGSGVTVAVIDSGITKHPDLDGKVLPGYDFISDRYAAGDGNGRDSDPSDEGDWTRAG CCCCCCCEEEEEECCCCCCCCCCCCEEECCCHHHCCCEECCCCCCCCCCCCCCCCCCCCC ACTRRDVPSSWHGTHVAGIIGAATNNARGVAGAAPGAKILPVRALGHCGGTDVDIADGIT CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCEE WASGGEVPGVPTNHNPAKVINLSLGGPSNYCPITYQRAIDAAVSRGSTVVVAAGNEAMDV ECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHH RKSTPGNCRNVVVVGATGETGAQSYFSNYGSTVDVSAPGGDDRTGDMILSTLNNGETTPA CCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHEEECCCCCCCCC APTYGYMEGTSQAAPHVSAVVALMIAANPNLTPARIKEILKQSVNPAKCKTGCGTGIVDA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHH RKAVKAAKSA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]