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The map label for this gene is ugpB [C]

Identifier: 50842090

GI number: 50842090

Start: 667515

End: 668735

Strand: Direct

Name: ugpB [C]

Synonym: PPA0604

Alternate gene names: 50842090

Gene position: 667515-668735 (Clockwise)

Preceding gene: 50842084

Following gene: 50842091

Centisome position: 26.07

GC content: 58.31

Gene sequence:

>1221_bases
ATGGAGGTCCTCATGTCAGATTCGTTGCCAATTTCGCGGCGCCGTGACCTCGGTCTGGGCGCTACGCTGGCTGCAGGTGT
CGGACTGTCCGCGTGTGGGGAAGGTGGCGACAAGGGCGGCTCTGCTACGGCGAAGGCGTCGCAACTCAACCTGGACACGT
TGTCGGGCGAGATCACCTTCCAGGCTCAGGGTCTGAAGGGAACCTTTGACGGGTTCTTCAACGACCTCATCAAGAAGTTC
GAGAAAGAGCATTCCGGATGCACGATCAAGTGGACGGATCTGCCGGGCACTGACGACTTCGACACCACGATGGTGACTCA
GGCGTCCAATGGCACGATGGCTGACGTCGTCAATATGCCGTCCTCGACCATCATGGCTCTGTCGAGGGCTGATTACCTGC
TCGATATCGAGACTTCGGTGCCCGGTATCGGCGACAAGTTCGTCCCGGACGTCTGGGGCAAACTCAAACTCGGCAAGGAC
AACGAGCACACCGCTCTGCCCTGGTACTTCGGCCCGTTCGTCGTGACGTACAACAAGGACATTTTCAAGGATGTTGGCCT
CGATCCCGAAATCCCGCCGAAGACGATGACCGAGTACCTCGACTTCGTCAAGAAAATCACCGCTGCCGGCAAGCAGGCGG
TCTATGGCAACACGTCGTGGTACATGCTCGCGGAATGGCGTGCCCTCGGCGTCAAGGTCATGAATGACGACTTCACCAAG
TTCACTTTTGCCTCGGAATCCAACGCGTTACTCTGGCTGACGACGATGGCCGACATGTATGCCAAGGGGGAATTTCGAAG
GACTCGATTGCCGGGGGCCTCCATCGGTCCAAGGTTTACGGTGAAGGATCCCTGGCTTTCGGCACGCCGAATGCGTCCTT
TCTTCGCAACATCCAAAAGAATGCCGCCCAGGCATATGCCCGTACCGGTGTTGGCCCAGAGCCTCTCAATGACGGCATCA
AGCCGCTGTTTTCCGGGCAATACATCGCGATCTCGAAGAAGACCAAGAACGCTTCGCTCGCGGCCGCTTTCGCAGAGTGG
ATCACCGGTGTGGACCAGGGCAAGGATGCCTTCGCTCAGGCTCGCGCCATCTGCGCCAAGGAAGCGACCAAGGCTGAGGC
CTACATGCCTGACTTCTATGTCACGCATGGCGTCAGCGCCGCGTTGGCTGACAATGTCAACCTTGCCATTATGGGTGATT
CCAAGCCGCAGGATGCCCTGA

Upstream 100 bases:

>100_bases
CTGTTTGTTTGCGCTCGCATTTGGTGCTACGCTCCCATTAACTCGACGATAGAAGTCGACGTCTACGCGCGTGGGCCACG
TGTCCGTGGGTGGAAGACCA

Downstream 100 bases:

>100_bases
ACACTGCTCAGGACAAGATGAACAAGATGCTGGCGAAGCTCCCTTGGTGACGTCATCCTTGGTGGGAGGGGGCACGGTCG
CCCCTCCGTGTCCGGACCAG

Product: putative sugar binding protein

Products: NA

Alternate protein names: MalE-Type ABC Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Component-Like Protein; Transcriptional Regulator ABC Transporter; Male-Type Abc Sugar Transport System Periplasmic Component; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter; ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITFQAQGLKGTFDGFFNDLIKKF
EKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMPSSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKD
NEHTALPWYFGPFVVTYNKDIFKDVGLDPEIPPKTMTEYLDFVKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK
FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRFTVKDPWLSARRMRPFFATSKRMPPRHMPVPVLAQSLSMTAS
SRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWTRARMPSLRLAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVI
PSRRMP

Sequences:

>Translated_406_residues
MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITFQAQGLKGTFDGFFNDLIKKF
EKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMPSSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKD
NEHTALPWYFGPFVVTYNKDIFKDVGLDPEIPPKTMTEYLDFVKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK
FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRFTVKDPWLSARRMRPFFATSKRMPPRHMPVPVLAQSLSMTAS
SRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWTRARMPSLRLAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVI
PSRRMP
>Mature_406_residues
MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITFQAQGLKGTFDGFFNDLIKKF
EKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMPSSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKD
NEHTALPWYFGPFVVTYNKDIFKDVGLDPEIPPKTMTEYLDFVKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK
FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRFTVKDPWLSARRMRPFFATSKRMPPRHMPVPVLAQSLSMTAS
SRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWTRARMPSLRLAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVI
PSRRMP

Specific function: Sn-Glycerol-3-Phosphate And Glycerophosphoryl Diester- Binding Protein Interacts With The Binding Protein-Dependent Transport System Ugpace. [C]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45030; Mature: 45030

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITF
CCEEECCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCHHHCCEEEECCCEEEE
QAQGLKGTFDGFFNDLIKKFEKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMP
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCEEHHCCCC
SSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKDNEHTALPWYFGPFVVTYNKD
CHHHHHEECCCEEEEECCCCCCCCCCCCHHCCCEEEECCCCCCCCCCEEECCEEEEECHH
IFKDVGLDPEIPPKTMTEYLDFVKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHEECCEEEECCCCEE
FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRFTVKDPWLSARRMRPFFATSKR
EEEECCCCCEEEEEEHHHHHHCCCCCEEECCCCCCCCEEEECCCCHHHHHCCCHHHHCCC
MPPRHMPVPVLAQSLSMTASSRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWTRARMPSLR
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCEEEECCCCCEE
LAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVIPSRRMP
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCC
>Mature Secondary Structure
MEVLMSDSLPISRRRDLGLGATLAAGVGLSACGEGGDKGGSATAKASQLNLDTLSGEITF
CCEEECCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCHHHCCEEEECCCEEEE
QAQGLKGTFDGFFNDLIKKFEKEHSGCTIKWTDLPGTDDFDTTMVTQASNGTMADVVNMP
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCEEHHCCCC
SSTIMALSRADYLLDIETSVPGIGDKFVPDVWGKLKLGKDNEHTALPWYFGPFVVTYNKD
CHHHHHEECCCEEEEECCCCCCCCCCCCHHCCCEEEECCCCCCCCCCEEECCEEEEECHH
IFKDVGLDPEIPPKTMTEYLDFVKKITAAGKQAVYGNTSWYMLAEWRALGVKVMNDDFTK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHEECCEEEECCCCEE
FTFASESNALLWLTTMADMYAKGEFRRTRLPGASIGPRFTVKDPWLSARRMRPFFATSKR
EEEECCCCCEEEEEEHHHHHHCCCCCEEECCCCCCCCEEEECCCCHHHHHCCCHHHHCCC
MPPRHMPVPVLAQSLSMTASSRCFPGNTSRSRRRPRTLRSRPLSQSGSPVWTRARMPSLR
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCEEEECCCCCEE
LAPSAPRKRPRLRPTCLTSMSRMASAPRWLTMSTLPLWVIPSRRMP
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA