| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842031
Identifier: 50842031
GI number: 50842031
Start: 601089
End: 601631
Strand: Direct
Name: 50842031
Synonym: PPA0547
Alternate gene names: NA
Gene position: 601089-601631 (Clockwise)
Preceding gene: 50842030
Following gene: 50842032
Centisome position: 23.48
GC content: 61.33
Gene sequence:
>543_bases ATGCTAGAAGAATTTACTGAGAACGACCGTCAGGACGTCCGGGACCAGCTTGGCCGCGAACCACGAGGAGTCGCCGGTGT GGCCTGGCGCTGTGGTTGCGGTAAACCAGGTGTCATTGCTACCGAGCCTCGGCTGCCGAACGGCACCCCGTTTCCGACGA CTTATTACCTTACCTGTCCGCGTGCTGCATCCCTCATTGGGACCCTGGAGTCTTCGGGGCTGATGGCTCGGATGACCGAA CGACTCGGTGAGGATGAGGAGCTTGCCGACCAGTACCGGCGCGCCCATGAGTCCTATATTGCTGATCGCGTTCAGATCGG CGAGGACGCCGGTCTTGACCCGGTTCCTGAGATCGATGGGATTTCCGCTGGCGGTATGCCGACGCGCGTGAAATGTCTGC ATGCTCTGGCAGGGCACGCCTTAGCTGTCGGGCCTGGGGTCAACCCGTTTGGGGATGAGGTCGTTGCAGAGCTGGGAGAG TTCTGGTGCGACCCATGCGCCCCTGAGCATCGCGAGCCCGAGTCGGACAGGAGGATTGTATGA
Upstream 100 bases:
>100_bases GACCATCCCGCCCCGCCCCACCCCTCCCCGGGGGCGATGATCACGCCTACACCTTCAGCGAAGTTGTCTTCGCCCAGCCC TTCTCGTCGATGAGGTGACC
Downstream 100 bases:
>100_bases GCGGCAGCCACACCGTTGCAGCTATCGACTGCGGGACGAATTCGATTCGCCTCCTCATCGCATCAGCCGATTCGGACGGG CGTTTGGTCGAGCAGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCPRAASLIGTLESSGLMARMTE RLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDGISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGE FWCDPCAPEHREPESDRRIV
Sequences:
>Translated_180_residues MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCPRAASLIGTLESSGLMARMTE RLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDGISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGE FWCDPCAPEHREPESDRRIV >Mature_180_residues MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCPRAASLIGTLESSGLMARMTE RLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDGISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGE FWCDPCAPEHREPESDRRIV
Specific function: Unknown
COG id: COG1507
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19573; Mature: 19573
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCP CCCCHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECC RAASLIGTLESSGLMARMTERLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDG HHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGEFWCDPCAPEHREPESDRRIV CCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEEFTENDRQDVRDQLGREPRGVAGVAWRCGCGKPGVIATEPRLPNGTPFPTTYYLTCP CCCCHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECC RAASLIGTLESSGLMARMTERLGEDEELADQYRRAHESYIADRVQIGEDAGLDPVPEIDG HHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ISAGGMPTRVKCLHALAGHALAVGPGVNPFGDEVVAELGEFWCDPCAPEHREPESDRRIV CCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA