| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842016
Identifier: 50842016
GI number: 50842016
Start: 585914
End: 587191
Strand: Direct
Name: 50842016
Synonym: PPA0532
Alternate gene names: NA
Gene position: 585914-587191 (Clockwise)
Preceding gene: 50842015
Following gene: 50842017
Centisome position: 22.88
GC content: 60.17
Gene sequence:
>1278_bases ATGTGGCCCATCAGGACGGTGCGGGCCTATTGCGCGGGGACCGTGGCGACGGCCGTCGCCCTAGCTGCTTTTGTTACGAG CGGGGCCCACGCCGCAGGGGCTAGGGAAACGAGCAAGCCGCAGGCATATCCAGTTCCTGGTCTTTTCCATCCGTGCGGTG GTTCCGTGACTCCTGACTGGCACTACGGCGAGACAAGCCGCCACTACCAGTCCGACGGAACTCTGCAGTTCACGAACCAA ACCGACCATGCTGTCGACTACACCGCCAGTGTAAAGACATCGACAAACCACAAGATCGATTCCAACTCGGCATCCAAGCT TCCCCCGAACTGGAACACCACCCTCAAGACGGAATTAGGGATCGTTGCCTCCAACGGGTGGCAGGATAAGGAGACTTTCG GTCCCGTCAAACTTGGCCCTGGAGAGTCTTTCCGGGTTGAGTACGGTGTCACCGTCAAGAACTTCGTGGGCATGTTCTTG GGGTGCCGGGACGGATATTTAGAGCCCAGCGGTGGCGCTAACGTCATCCAGGGCACCGCGCCAGCCGAGCGTTACGCCTA CGCTCTCGTCATCCACAAGGATGGTTCCATCTCGGATCGAGCCCTGGCCATCCCCTCGCGAGGGTCAGGCAAGAACAGCC GGATCGTTGATGACCACGACATTGTCATGGCCGGACCTAATCTGGAGAAACTTGCCGATCCCAGCAAGGATGTCCCGGTC GAACCGACTAGCCCATTGCAGCGCGATCCCTCCTGGCCTAAGCAGGGGGAGCGATGCCCGGCGAGGGGTTGGTACCCGTT GGACATCTCCGGTATTGATCCGCTCATCCGTCAACCCGGGTATTCTCAGGACTTCCTCAATTGGTCCAAGGGCCAGTACC ACTTCACTCCTGTCACTGACACCGTCGTGGGAGCTCAATTCGCTGGATACGTGAACTGGAATCCCGCCGCCGACGGGCCA CCACGCGGATGGCTGGAGTCCGTTGGGGCGATTTACCGCGCCTACCTACCCGTCAGGACCGAGCTTAAGGGCGTTGATCT CGCACCTGGGGAGAAGGTTCACGTCGAATATGGCACCCTGCTACGCCGAGTGAACTACCGCGAGGTCGGTTGCAAAAACG GTGTCGCATCTATCGTGTCGCATTACGGACTGGCTTCCGCGCCTGCCGGGTTCTGGGCTGAGGCCACTATTACCGGCACT GATGGGACCAAACGCACCGTCGACGTAACGCCTGACGCGTGGAAGCATCTTCCCGTACCCACCCAGACGACCCGCTGA
Upstream 100 bases:
>100_bases CCCTCTCGGTTGATACCGTCTATCTGTCAAGGTCAGATCTTGGCCGGGAGCGTGCCCTTGCTGTCGGGTGCACCTCCGAC CTGCCTCGATTGGAGGGAAT
Downstream 100 bases:
>100_bases TACCCATTCCCATTCGCGTCTTGGAAGGAACCACAATGATTCGCTCACTCGTTGCTACTCTCGCTGTCGGGGCAATCGTC ACCGCTGGTGCCCAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDWHYGETSRHYQSDGTLQFTNQ TDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELGIVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFL GCRDGYLEPSGGANVIQGTAPAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTDTVVGAQFAGYVNWNPAADGP PRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTLLRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGT DGTKRTVDVTPDAWKHLPVPTQTTR
Sequences:
>Translated_425_residues MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDWHYGETSRHYQSDGTLQFTNQ TDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELGIVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFL GCRDGYLEPSGGANVIQGTAPAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTDTVVGAQFAGYVNWNPAADGP PRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTLLRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGT DGTKRTVDVTPDAWKHLPVPTQTTR >Mature_425_residues MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDWHYGETSRHYQSDGTLQFTNQ TDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELGIVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFL GCRDGYLEPSGGANVIQGTAPAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTDTVVGAQFAGYVNWNPAADGP PRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTLLRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGT DGTKRTVDVTPDAWKHLPVPTQTTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45953; Mature: 45953
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HYGETSRHYQSDGTLQFTNQTDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELG CCCCCCCEECCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE IVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFLGCRDGYLEPSGGANVIQGTA EEECCCCCCHHCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC PAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEECCCCEEEECCCHHHHCCCCCCCCC EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTD CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCHHHCCCCCCEEEEECCHH TVVGAQFAGYVNWNPAADGPPRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTL HHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHH LRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGTDGTKRTVDVTPDAWKHLPVP HHHCCHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCC TQTTR CCCCC >Mature Secondary Structure MWPIRTVRAYCAGTVATAVALAAFVTSGAHAAGARETSKPQAYPVPGLFHPCGGSVTPDW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HYGETSRHYQSDGTLQFTNQTDHAVDYTASVKTSTNHKIDSNSASKLPPNWNTTLKTELG CCCCCCCEECCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE IVASNGWQDKETFGPVKLGPGESFRVEYGVTVKNFVGMFLGCRDGYLEPSGGANVIQGTA EEECCCCCCHHCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC PAERYAYALVIHKDGSISDRALAIPSRGSGKNSRIVDDHDIVMAGPNLEKLADPSKDVPV CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEECCCCEEEECCCHHHHCCCCCCCCC EPTSPLQRDPSWPKQGERCPARGWYPLDISGIDPLIRQPGYSQDFLNWSKGQYHFTPVTD CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCHHHCCCCCCEEEEECCHH TVVGAQFAGYVNWNPAADGPPRGWLESVGAIYRAYLPVRTELKGVDLAPGEKVHVEYGTL HHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHH LRRVNYREVGCKNGVASIVSHYGLASAPAGFWAEATITGTDGTKRTVDVTPDAWKHLPVP HHHCCHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCC TQTTR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA