| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841758
Identifier: 50841758
GI number: 50841758
Start: 319949
End: 320923
Strand: Direct
Name: 50841758
Synonym: PPA0268
Alternate gene names: NA
Gene position: 319949-320923 (Clockwise)
Preceding gene: 50841757
Following gene: 50841759
Centisome position: 12.5
GC content: 58.05
Gene sequence:
>975_bases ATGCGGACAAGGGACGATCGGGGTGCCGCCGCGCCGGAATACATCGCAATTCTCCTTATTGCGGCTATGTTCACCAGTGC GGTGGCGGTCGGCGTCAAGCCGGAATGGGTGCAGCAGAAGGTGTGCCAGGCCTTGGCGGTTATCTTCGGGAAGGGTTCGT GTGCTCCGGCGAGCCAGGCGAAGCCGCCGGCCCAGCAGCTGCCTAAGCGCTGCTTGATTCACTCCGACGAGAATGCCACG TCAATCTATGCCGAGGGAAAGATCACCTGGGTCACGATCGGTGGGGAAGGTGGATACGGCTACCATTTGGTTGAGTACAG CGATGGTAAAGCTGACGTTGAATTGTTCTATAACGTCGGGGCAAGTGCCGGCGCCGCAGCGCCTGGCTGGAGTAAAGGCC CCGCCAGCCTCGACGCGTCCATCACCGGGTCGGCAAAGTACACGAAGGGTGAGACTGTCCATTACGACAGCGTCGCCGCT GCTCGCGCAGATCGGGACAGCTTGAACAAGTACGCTCGAGAACGTGCGCTGGCGGTCATGCATCTTGGCAGTGCCCCCGA TGTCCCCAACTCCCGGCTTTCTTCGACTTCGAGGACAGTAGAAGTCGATGTCAAAGGTAAGGCGACTCTCAAGGTTAAGG CTAAAGTCGGTGGTCACGGTTCAGCCGATGCTGGTGCCAGCGGCAGTGTTAACGGCATTGTTCAGTACATAACTAAGCGT GATTCGAAGACCGGTGCGGTAACGCACACGGTTGAAGCTTTGGGATCGGCTAATGGTGATGCCCATGCGAACGCGGGCGC GACGATGGGTAACCACGGCGTCAAAACACCAACTGTCGGCGGTCATGCCGGGCTTGATGACGATACCTCGGTGTCGGTAA CCAAAGACAATTCTGGGAAGATTACAGAGCTTGTCATCACCAAGAGCGGTGCCGAAGGCGCCGATTTCGGCGTGGATGGT GACTTCAAAATTTGA
Upstream 100 bases:
>100_bases GCCCGGCTTGGGCCCCGGTTTGGGGCCATGGGCTCAGGTGCGGCTATGGGTTTCTTTTTATGCTCTCCCCTGTATTGGGT AGGTAGTGGAGGGGAGACCC
Downstream 100 bases:
>100_bases GCTGGGTAAGCCGAGGCTTGTTCCTGGTCCGGGTAAGCCGAGGCTTGTTTCTGGTCCGGGTAAGCCGAGGCTTGTTTCTG GTCCGGGTAAGCCGAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQAKPPAQQLPKRCLIHSDENAT SIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVGASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAA ARADRDSLNKYARERALAVMHLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGKITELVITKSGAEGADFGVDG DFKI
Sequences:
>Translated_324_residues MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQAKPPAQQLPKRCLIHSDENAT SIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVGASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAA ARADRDSLNKYARERALAVMHLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGKITELVITKSGAEGADFGVDG DFKI >Mature_324_residues MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQAKPPAQQLPKRCLIHSDENAT SIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVGASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAA ARADRDSLNKYARERALAVMHLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGKITELVITKSGAEGADFGVDG DFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33248; Mature: 33248
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQA CCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC KPPAQQLPKRCLIHSDENATSIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVG CCCHHHHHHHHEEECCCCCEEEEECCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECC ASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAAARADRDSLNKYARERALAVM CCCCCCCCCCCCCCCCCCCEECCCCEECCCCEEEECCHHHHHCCHHHHHHHHHHHHEEEE HLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR ECCCCCCCCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGK CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC ITELVITKSGAEGADFGVDGDFKI EEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRTRDDRGAAAPEYIAILLIAAMFTSAVAVGVKPEWVQQKVCQALAVIFGKGSCAPASQA CCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC KPPAQQLPKRCLIHSDENATSIYAEGKITWVTIGGEGGYGYHLVEYSDGKADVELFYNVG CCCHHHHHHHHEEECCCCCEEEEECCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECC ASAGAAAPGWSKGPASLDASITGSAKYTKGETVHYDSVAAARADRDSLNKYARERALAVM CCCCCCCCCCCCCCCCCCCEECCCCEECCCCEEEECCHHHHHCCHHHHHHHHHHHHEEEE HLGSAPDVPNSRLSSTSRTVEVDVKGKATLKVKAKVGGHGSADAGASGSVNGIVQYITKR ECCCCCCCCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC DSKTGAVTHTVEALGSANGDAHANAGATMGNHGVKTPTVGGHAGLDDDTSVSVTKDNSGK CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC ITELVITKSGAEGADFGVDGDFKI EEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA