| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841759
Identifier: 50841759
GI number: 50841759
Start: 320859
End: 321536
Strand: Direct
Name: 50841759
Synonym: PPA0270
Alternate gene names: NA
Gene position: 320859-321536 (Clockwise)
Preceding gene: 50841758
Following gene: 50841760
Centisome position: 12.53
GC content: 56.49
Gene sequence:
>678_bases TTGTCATCACCAAGAGCGGTGCCGAAGGCGCCGATTTCGGCGTGGATGGTGACTTCAAAATTTGAGCTGGGTAAGCCGAG GCTTGTTCCTGGTCCGGGTAAGCCGAGGCTTGTTTCTGGTCCGGGTAAGCCGAGGCTTGTTTCTGGTCCGGGTAAGCCGA GGCCTGTTCCTGGTCCAGTTAGGTGGAAGCCTGAGCCCAATAAGACTCGCGATGCCGGTAACAACGAGGGCCGCCACGGC AAGCAGGGCAAGGGGAGTACTTTGTCTAAGAAGCCGGGTCGCGAGGAGGAGTCCGACGGTGACCACAAGAGTCGTGAGAC GACCACCATCCGGGTAGCCGTCAACGACCAGAACCGGAGTCAGGTCGAAAAGTGGCTCGGGGATAACGATGTCGGCCCCT CCAACGCAGTGCCACTGCTGGTCAAGGCGCGGTTTATGAACCCGCTGGACGCTGACGCCACTAACGACTTCGCTAAGTTT CTTTACCAGTCTGAGGACACCCAGATCGACACGCAGACGAGCAGTGAGACTTCCGATTTGAAGGACGATTCATATGACAT TTTGGTCGCGAAGGTCGGAGAAAAAGATGCTAGGGAATCCAGTTCGTCCACCGGTCAGATGGGTTATCTCTTGGAGAACG GCAAACGTGTCCCCAAGATTAGTGAGGGGTGCAAGTAA
Upstream 100 bases:
>100_bases AACCACGGCGTCAAAACACCAACTGTCGGCGGTCATGCCGGGCTTGATGACGATACCTCGGTGTCGGTAACCAAAGACAA TTCTGGGAAGATTACAGAGC
Downstream 100 bases:
>100_bases GTGACTCCCCGCAGACCTCGATGAGTGCCTGCGAGGCAGTCCTAGACTCCACTGCATGATCAATGTCGGCTCGGCTACCA ACTCGCATCCCGCCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSSPRAVPKAPISAWMVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPVRWKPEPNKTRDAGNNEGRHG KQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRSQVEKWLGDNDVGPSNAVPLLVKARFMNPLDADATNDFAKF LYQSEDTQIDTQTSSETSDLKDDSYDILVAKVGEKDARESSSSTGQMGYLLENGKRVPKISEGCK
Sequences:
>Translated_225_residues MSSPRAVPKAPISAWMVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPVRWKPEPNKTRDAGNNEGRHG KQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRSQVEKWLGDNDVGPSNAVPLLVKARFMNPLDADATNDFAKF LYQSEDTQIDTQTSSETSDLKDDSYDILVAKVGEKDARESSSSTGQMGYLLENGKRVPKISEGCK >Mature_224_residues SSPRAVPKAPISAWMVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPVRWKPEPNKTRDAGNNEGRHGK QGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRSQVEKWLGDNDVGPSNAVPLLVKARFMNPLDADATNDFAKFL YQSEDTQIDTQTSSETSDLKDDSYDILVAKVGEKDARESSSSTGQMGYLLENGKRVPKISEGCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24420; Mature: 24288
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPRAVPKAPISAWMVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPV CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCCC RWKPEPNKTRDAGNNEGRHGKQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH QVEKWLGDNDVGPSNAVPLLVKARFMNPLDADATNDFAKFLYQSEDTQIDTQTSSETSDL HHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCC KDDSYDILVAKVGEKDARESSSSTGQMGYLLENGKRVPKISEGCK CCCCEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCHHCCCC >Mature Secondary Structure SSPRAVPKAPISAWMVTSKFELGKPRLVPGPGKPRLVSGPGKPRLVSGPGKPRPVPGPV CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCCC RWKPEPNKTRDAGNNEGRHGKQGKGSTLSKKPGREEESDGDHKSRETTTIRVAVNDQNRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH QVEKWLGDNDVGPSNAVPLLVKARFMNPLDADATNDFAKFLYQSEDTQIDTQTSSETSDL HHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCC KDDSYDILVAKVGEKDARESSSSTGQMGYLLENGKRVPKISEGCK CCCCEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA