| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50841737
Identifier: 50841737
GI number: 50841737
Start: 298544
End: 299350
Strand: Direct
Name: 50841737
Synonym: PPA0245
Alternate gene names: NA
Gene position: 298544-299350 (Clockwise)
Preceding gene: 50841736
Following gene: 50841738
Centisome position: 11.66
GC content: 63.82
Gene sequence:
>807_bases GTGAGCAAGGCGATCAAGAGGACTGCAGCGGACTCCACCGACGCCGAGACCACCCGGGTCATCCGGACGGGGGCCTCCCG CGTGGATGCCGATGTCAACCCCACTGAGGTGATCAAGCCCAGTGATTCAGCGGATTCGGAGCGCACCAGCGTCATCGACG ACAATGTTTTCCGTCCTGACTCCGAGACGACTCGTGTTGTGGACGATCGCGAGTTCGAGGAGGAGCGTCGCCGTCGCGAA TTGGCCGAGCAGCGCGCCCGCGAGCGCGCCGACCGTCAGGCTATCGAGGTCGAGCGTCAGCGTCGTGCCGCCCATGCCGA GCCCGAGCCGGAGCAGGTTGCTGAACCGGCCCCCAAGCGCACCACCGACAAGGTCATGGCATCCCTGGGCCTGTTCTTGT TCCGCCTCATCGTAGGCGGGATTCTTGGGGTTCACGGATTCCAGCACCTCGCCCAGCGAGACCTCACATTGCGCGCGGTA CAGGCTCTCCCACTACCCAGCGGATACGCCCAGTCCGGTGTGTGGGTGCTGGGCATCTGCGAGTGCATTGCCGCGGTGTG CATCATCCTTGGCCTGTTTACCCGCGTCGCGGGAGCCGGCATCATTGCGATTATGGTGTTGTCCTTGACTTTCATCTTCT GGGGCAGTTTTGCCATCTTCAAAACGATGGGCTTCAAGGGCGAGCTGGAGCTGCTGCTGGCTGCATGCGGCGTGCTGTTG TTGTTCCTGGGTGCCGGTGGCTGGTCCATTGACGCCGCCTACCGGCGTAGCCGCGCTGCTGCGAAGGCAGAGGAGGTCGG CGACTGA
Upstream 100 bases:
>100_bases ACAACGGTGTGTTGCGCCGCTGTGGCAGCGAGTTTCGTGGCACAGTGTGAGTGTGCCGTGCCGTATCCTCGGTGCGGTTC CCAAGTCGTGAGGATTGAGC
Downstream 100 bases:
>100_bases GCCGAATCGTAGCGGTAGCCTTCCGCGAATACGGTCAACTTTTTCACCTCGACGTCGGGACCCTCGACGTCGAGGTGGGT TCGTGGCTGCTATATCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPDSETTRVVDDREFEEERRRRE LAEQRARERADRQAIEVERQRRAAHAEPEPEQVAEPAPKRTTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAV QALPLPSGYAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL LFLGAGGWSIDAAYRRSRAAAKAEEVGD
Sequences:
>Translated_268_residues MSKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPDSETTRVVDDREFEEERRRRE LAEQRARERADRQAIEVERQRRAAHAEPEPEQVAEPAPKRTTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAV QALPLPSGYAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL LFLGAGGWSIDAAYRRSRAAAKAEEVGD >Mature_267_residues SKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPDSETTRVVDDREFEEERRRREL AEQRARERADRQAIEVERQRRAAHAEPEPEQVAEPAPKRTTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAVQ ALPLPSGYAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLLL FLGAGGWSIDAAYRRSRAAAKAEEVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29314; Mature: 29183
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPD CCHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCC SETTRVVDDREFEEERRRRELAEQRARERADRQAIEVERQRRAAHAEPEPEQVAEPAPKR CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCH TTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAVQALPLPSGYAQSGVWVLGIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LFLGAGGWSIDAAYRRSRAAAKAEEVGD HHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKAIKRTAADSTDAETTRVIRTGASRVDADVNPTEVIKPSDSADSERTSVIDDNVFRPD CHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCC SETTRVVDDREFEEERRRRELAEQRARERADRQAIEVERQRRAAHAEPEPEQVAEPAPKR CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCH TTDKVMASLGLFLFRLIVGGILGVHGFQHLAQRDLTLRAVQALPLPSGYAQSGVWVLGIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGELELLLAACGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LFLGAGGWSIDAAYRRSRAAAKAEEVGD HHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA