| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841722
Identifier: 50841722
GI number: 50841722
Start: 282461
End: 283438
Strand: Direct
Name: 50841722
Synonym: PPA0229
Alternate gene names: NA
Gene position: 282461-283438 (Clockwise)
Preceding gene: 50841718
Following gene: 50841723
Centisome position: 11.03
GC content: 63.29
Gene sequence:
>978_bases TTGGTGACCCGGGATAGTCGATTGGCGGAGGTCGTCGGGTCAGTGGCAGCCAGCGGTGGGGTTGGTGTGGAAGTCTTAGG GGGCCGCGAAGCCGTGTCACGGGCTTGGTCGAGGAATGGTCCATTGCTGGTAGGAGCGGACATGGCTGGGTCGGTGATGG CGTGGGGGCTGTCTCCACGGTCGGGCACCTATGTCGTCGGTTTCGACGCTGAGGAGGCGGCACGCTGGTCGGCGGGACTA TCGGCCAGCGTCATCGTCGTGCCGCGAGCCAATCAGGTGCTTACTGAGATTCTCCATGACGAACTGGCGACGACATCGAG GGCCACAGTGGTGCAGGTGAATTCGAGTGGAGGCGGTACTGGGGTCAGCACCTTGGCATCAGGTCTGGCATGGGCCGCTG CGAGGTCGGGGATAAAAGTTGGGCTGGTTGAACTTAATCCCAGTGCCGGCGGGATCGACCTGCTGCTAGGCATCGAGAGA AAAGACGGGTGGCGGTGGCCTGAGTTGGCGTCGGCCCGCGGGGTGACGACTGATTTGGGGTCTCACGTGCCTTCCCTCGA CGGTGTTGAGGTGGTGAGTGCAGGCAGGGTGGGTGTTCACGTGCCTCCAGCAGCTCGTAGAGCTGTGGTTGATTCCCTGG CTGGCGATCACGATCTTGTCGTCGTGGATCCGGGAGGTCTTGATACTCCGGAGGTCACGGTGAACGTCAAGGTCGGGGTG GTGGCGGCTGACCTCAGATCTGTGATGACGGCCAGAGGGCAGAACCTTCCGGACCTCCTCGTAGCGCGGCGAGGGCCGGG ACGATCCATGCCTGACGAGGATATCGAGTCGGTGTTGGGGGTACGGCCCGATATGACGATCAAGGATGACCGCCGACTGG CTCGTGGCCAGGGGGACGGGGAAGCGCCATGGGTGGTGGCCTCCCGACGATGGCGTAGCGGGTGCGCTGAGCTCGTTGAT CAGGTGATGGGCTCATGA
Upstream 100 bases:
>100_bases TCCGACGACAACTGAAGGTATGAAGATTCTTGGACAAGGACGGGGCGCTGCGGTGCATCGGCCTGCGCATAGTGCTGCCC CGGAGGAGACAACGGTCGTC
Downstream 100 bases:
>100_bases GCGGAGAAGAACCGGATCTCAAGCTCGTCGAGCAGGTGCGACGCCGACTGGCTGGCCTTGCGCGGGACTGGACACCGATG GACGTCGCCCACGCCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MVTRDSRLAEVVGSVAASGGVGVEVLGGREAVSRAWSRNGPLLVGADMAGSVMAWGLSPRSGTYVVGFDAEEAARWSAGL SASVIVVPRANQVLTEILHDELATTSRATVVQVNSSGGGTGVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIER KDGWRWPELASARGVTTDLGSHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGLDTPEVTVNVKVGV VAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTIKDDRRLARGQGDGEAPWVVASRRWRSGCAELVD QVMGS
Sequences:
>Translated_325_residues MVTRDSRLAEVVGSVAASGGVGVEVLGGREAVSRAWSRNGPLLVGADMAGSVMAWGLSPRSGTYVVGFDAEEAARWSAGL SASVIVVPRANQVLTEILHDELATTSRATVVQVNSSGGGTGVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIER KDGWRWPELASARGVTTDLGSHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGLDTPEVTVNVKVGV VAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTIKDDRRLARGQGDGEAPWVVASRRWRSGCAELVD QVMGS >Mature_325_residues MVTRDSRLAEVVGSVAASGGVGVEVLGGREAVSRAWSRNGPLLVGADMAGSVMAWGLSPRSGTYVVGFDAEEAARWSAGL SASVIVVPRANQVLTEILHDELATTSRATVVQVNSSGGGTGVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIER KDGWRWPELASARGVTTDLGSHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGLDTPEVTVNVKVGV VAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTIKDDRRLARGQGDGEAPWVVASRRWRSGCAELVD QVMGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33552; Mature: 33552
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRDSRLAEVVGSVAASGGVGVEVLGGREAVSRAWSRNGPLLVGADMAGSVMAWGLSPR CCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCEEEECCCCC SGTYVVGFDAEEAARWSAGLSASVIVVPRANQVLTEILHDELATTSRATVVQVNSSGGGT CCEEEEEECHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC GVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIERKDGWRWPELASARGVTTDLG HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHCCCCCCHHHH SHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGLDTPEVTVNVKVGV CCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEE VAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTIKDDRRLARGQGDG EHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHCCCCCC EAPWVVASRRWRSGCAELVDQVMGS CCCEEEECHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTRDSRLAEVVGSVAASGGVGVEVLGGREAVSRAWSRNGPLLVGADMAGSVMAWGLSPR CCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCEEEECCCCC SGTYVVGFDAEEAARWSAGLSASVIVVPRANQVLTEILHDELATTSRATVVQVNSSGGGT CCEEEEEECHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC GVSTLASGLAWAAARSGIKVGLVELNPSAGGIDLLLGIERKDGWRWPELASARGVTTDLG HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHCCCCCCHHHH SHVPSLDGVEVVSAGRVGVHVPPAARRAVVDSLAGDHDLVVVDPGGLDTPEVTVNVKVGV CCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEE VAADLRSVMTARGQNLPDLLVARRGPGRSMPDEDIESVLGVRPDMTIKDDRRLARGQGDG EHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEECCCHHHHCCCCCC EAPWVVASRRWRSGCAELVDQVMGS CCCEEEECHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA