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The map label for this gene is yggR [C]

Identifier: 50841723

GI number: 50841723

Start: 283435

End: 284601

Strand: Direct

Name: yggR [C]

Synonym: PPA0230

Alternate gene names: 50841723

Gene position: 283435-284601 (Clockwise)

Preceding gene: 50841722

Following gene: 50841724

Centisome position: 11.07

GC content: 62.9

Gene sequence:

>1167_bases
ATGAGCGGAGAAGAACCGGATCTCAAGCTCGTCGAGCAGGTGCGACGCCGACTGGCTGGCCTTGCGCGGGACTGGACACC
GATGGACGTCGCCCACGCCATTCTCGACTGTGGCCGGGTGGCTTCAGACAAAACCGTACTGGCGGTCGTCGAAGAGCTAC
GCCGCACCAGCACTGGGGCCGGGCGATTAGATCCTTTGCTGGCAATGGACGGGGTCACTGACGTCCTCGTCAACGGTCCC
AACCAGGTGTTTATCGACCGCGGACAAGGCCTGGAACTGACCGACGTCACCTTCAGCGGACCTGAGGAAGTAAGGGCTTT
AGCAGTGCGGCTGGCTGCAGCGGTGGGGCGTCGGCTCGATGACGGCAATCCGTGGGTGGATGCCAGGCTGCCAGACGGCA
CCCGGGTTCACGCTGTCTTGGATGTGCTGGCGAGGCCAGGGACCTGTCTTAGTTTGCGAGTGCCGTCCCGACGCTGCCTC
TCCCTCGACGATTGGGTAACCGGAGGATCGATGGCACCGGGGTGCCGACGGATGATCGACACAATTTTGAGCCGGAAGTT
GGCCTTCTTGGTAACTGGGGGTACCGGGACCGGAAAGACGACCCTGCTTTCCGCGATGCTGACGAGCTTGCCGTCGGACC
AAAGGCTGGTCATTGTGGAGGACTCCCGGGAGATCTGGATCGACCATCCGCACTGGGTGTCAATGGAGGCCCGCGCAGCC
AACTCTGAGGGTAAAGGATCGGTGACTCTGACCGACTTGGTCCGTCAGTGCTTGCGAATGAGGCCCGACCGGATCGTCCT
TGGAGAGGTGCGAGGGGCGGAACTGCGAGATCTCCTCATGGCCCTCAATACCGGTCATGAGGGTGGTTGCGGGACGGTGC
ACGCCAACGGGGTGGCTGAGGTGCCGGCTCGTCTGGAGGCTTTGGCTGCTTTGGGTGGGTTATCTCGGGAGGCGGCATCG
GCTCAGATCACCGCAGCCCTTCACACCGTCATTCATGTGGAGAGGGGAGAGAGGGGACGACGGGTGGCGGAGATTGGGGT
TTTCGTCGATGTCGAGGGTCGAGCTGTGGTCCTACCCGCCGTGCGGTGGGATGCCGACGGCGTGATGACTCTTGGCGACG
GTGCGGGGAGGTTGTCACAGTTGCTCGGAATGGAGGTGGCGCGATGA

Upstream 100 bases:

>100_bases
GACTGGCTCGTGGCCAGGGGGACGGGGAAGCGCCATGGGTGGTGGCCTCCCGACGATGGCGTAGCGGGTGCGCTGAGCTC
GTTGATCAGGTGATGGGCTC

Downstream 100 bases:

>100_bases
CGGTCATCGGAGCCTCCTTGCTTATGGGGTTGGCAGTATGGATAGCGATGCCATCCGCCACAAGGAAGCAGGAGGGGCGG
CATCTACCAGCGTGGTCGGG

Product: putative secretory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSGEEPDLKLVEQVRRRLAGLARDWTPMDVAHAILDCGRVASDKTVLAVVEELRRTSTGAGRLDPLLAMDGVTDVLVNGP
NQVFIDRGQGLELTDVTFSGPEEVRALAVRLAAAVGRRLDDGNPWVDARLPDGTRVHAVLDVLARPGTCLSLRVPSRRCL
SLDDWVTGGSMAPGCRRMIDTILSRKLAFLVTGGTGTGKTTLLSAMLTSLPSDQRLVIVEDSREIWIDHPHWVSMEARAA
NSEGKGSVTLTDLVRQCLRMRPDRIVLGEVRGAELRDLLMALNTGHEGGCGTVHANGVAEVPARLEALAALGGLSREAAS
AQITAALHTVIHVERGERGRRVAEIGVFVDVEGRAVVLPAVRWDADGVMTLGDGAGRLSQLLGMEVAR

Sequences:

>Translated_388_residues
MSGEEPDLKLVEQVRRRLAGLARDWTPMDVAHAILDCGRVASDKTVLAVVEELRRTSTGAGRLDPLLAMDGVTDVLVNGP
NQVFIDRGQGLELTDVTFSGPEEVRALAVRLAAAVGRRLDDGNPWVDARLPDGTRVHAVLDVLARPGTCLSLRVPSRRCL
SLDDWVTGGSMAPGCRRMIDTILSRKLAFLVTGGTGTGKTTLLSAMLTSLPSDQRLVIVEDSREIWIDHPHWVSMEARAA
NSEGKGSVTLTDLVRQCLRMRPDRIVLGEVRGAELRDLLMALNTGHEGGCGTVHANGVAEVPARLEALAALGGLSREAAS
AQITAALHTVIHVERGERGRRVAEIGVFVDVEGRAVVLPAVRWDADGVMTLGDGAGRLSQLLGMEVAR
>Mature_387_residues
SGEEPDLKLVEQVRRRLAGLARDWTPMDVAHAILDCGRVASDKTVLAVVEELRRTSTGAGRLDPLLAMDGVTDVLVNGPN
QVFIDRGQGLELTDVTFSGPEEVRALAVRLAAAVGRRLDDGNPWVDARLPDGTRVHAVLDVLARPGTCLSLRVPSRRCLS
LDDWVTGGSMAPGCRRMIDTILSRKLAFLVTGGTGTGKTTLLSAMLTSLPSDQRLVIVEDSREIWIDHPHWVSMEARAAN
SEGKGSVTLTDLVRQCLRMRPDRIVLGEVRGAELRDLLMALNTGHEGGCGTVHANGVAEVPARLEALAALGGLSREAASA
QITAALHTVIHVERGERGRRVAEIGVFVDVEGRAVVLPAVRWDADGVMTLGDGAGRLSQLLGMEVAR

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 41545; Mature: 41414

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEEPDLKLVEQVRRRLAGLARDWTPMDVAHAILDCGRVASDKTVLAVVEELRRTSTGA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GRLDPLLAMDGVTDVLVNGPNQVFIDRGQGLELTDVTFSGPEEVRALAVRLAAAVGRRLD
CCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
DGNPWVDARLPDGTRVHAVLDVLARPGTCLSLRVPSRRCLSLDDWVTGGSMAPGCRRMID
CCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCHHCCCHHCCCCCCCCHHHHHHHH
TILSRKLAFLVTGGTGTGKTTLLSAMLTSLPSDQRLVIVEDSREIWIDHPHWVSMEARAA
HHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHCCC
NSEGKGSVTLTDLVRQCLRMRPDRIVLGEVRGAELRDLLMALNTGHEGGCGTVHANGVAE
CCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHHH
VPARLEALAALGGLSREAASAQITAALHTVIHVERGERGRRVAEIGVFVDVEGRAVVLPA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEECCCEEEEEE
VRWDADGVMTLGDGAGRLSQLLGMEVAR
EEECCCCCEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGEEPDLKLVEQVRRRLAGLARDWTPMDVAHAILDCGRVASDKTVLAVVEELRRTSTGA
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GRLDPLLAMDGVTDVLVNGPNQVFIDRGQGLELTDVTFSGPEEVRALAVRLAAAVGRRLD
CCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
DGNPWVDARLPDGTRVHAVLDVLARPGTCLSLRVPSRRCLSLDDWVTGGSMAPGCRRMID
CCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCHHCCCHHCCCCCCCCHHHHHHHH
TILSRKLAFLVTGGTGTGKTTLLSAMLTSLPSDQRLVIVEDSREIWIDHPHWVSMEARAA
HHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHCCC
NSEGKGSVTLTDLVRQCLRMRPDRIVLGEVRGAELRDLLMALNTGHEGGCGTVHANGVAE
CCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHHH
VPARLEALAALGGLSREAASAQITAALHTVIHVERGERGRRVAEIGVFVDVEGRAVVLPA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEECCCEEEEEE
VRWDADGVMTLGDGAGRLSQLLGMEVAR
EEECCCCCEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]