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The map label for this gene is ykgF [H]

Identifier: 50841656

GI number: 50841656

Start: 202443

End: 203978

Strand: Direct

Name: ykgF [H]

Synonym: PPA0168

Alternate gene names: 50841656

Gene position: 202443-203978 (Clockwise)

Preceding gene: 50841655

Following gene: 50841657

Centisome position: 7.91

GC content: 60.94

Gene sequence:

>1536_bases
ATGAGTACCGAACTGCGTCGCGTCACGTACGGAAACCACGGCGTCGCCCGGTTGACCCCAGCCCCCGACAAGCCCGGCAC
GTACATGGGCATGCCGAAGTTTTCGAAGGCCGTCAAGGGCGAGTTGAACTTGTCGGTGCAGCGCAAGAACATGCGTAATG
CCACCATGACGATTCGCAACAAGCGCGCCATGCGTGTCTCCGAATCCCCGGATTGGCAGGATCTGCGTGATGCTGCCGAG
TCCATCAAGAATCGCGTCGGCCGCCACCTCGACCATTACCTCGTTGAGGCGGAGAAGAACCTGACTGCGAATGGCGTTCA
CGTCCACTGGGCCCGGGACGGCGAGGAGGCCAACCGCATCGTCGCCCAGATCGCCAAGGATAAGGGGGTTGACGAGGTCG
TCAAGATCAAGTCGATCACCAGTCAGGAAACTGACCTCAACGAGTACCTCGAAGAGCAAGGCATCGCGGCGTGGGAGACG
GACCTAGCCGAACTCATCGTGCAGCTGGGCCACGACCGTCCGTCCCACATTGTCGTGCCGGCTATCCACCGTAACCGTGC
TGAGGTCCGCGAGATCTTCCTACATGAGATGAAGAATTATGGCCGTCCGGCCCCCGAGGACATCTCGGAGAACCCGCCGG
AGCTAACCAACGCGGCTCGTCTGCACTTGCGCGAGAAGTTCCTGCGCGCCGAAATGGCCGTCTCGGGTGGCAATTTCGTG
CTCGCCGATACTGGGTCCTTAGTGATCGTTGAGTCTGAGGGCAATGGCCGTATGTGCCTGACTCTGCCGGACACCCTGGT
GTCGATTGTCGGCATCGAGAAGGTGCTGCCGAGTTTCGACGACCTTGAGGTTTTCCTCAAGCTGTTGCCGCGTTCGGCCA
CCGGGGAACGGATGAACCCGTACAACTCGGTGTGGAGTGGTGTGACCGACGGTGACGGGCCGCAGGAACAGCACGTCATT
TTCCTTGATAACGGTCGTACCGACGTGCTTGCCGACACCCTTGGCCGCGAGGTGTTGCGGTGCATTCGGTGCGCTTCGTG
TATCAACATCTGCCCGGTTTACGAGCGGGCGGGCGGTCACGCTTACGGCTCGGTGTACCCGGGGCCGATCGGTGCTGTGC
TCAATCCGCAGTTGCGGGGCGTGGAGCATCCCGTCGATCGTGGTCTGCCGTATGCGTGTTCGCTGTGCGGTGCGTGTAAT
GAGGTATGCCCGGTGAAGATCCCCTTCACCGATATCCTCCTCAAGCTGCGTAATAAGGTGGTCAAGTCCGAGAAAGCCGA
CCGTATACCGCAGGACTACGAGGTGGCCGGCGAGATGGGTCTCATGAAGACGGCCTCGTGGGCGTTCAGTGATCACAAAC
ATTTCGAGGCGATCCAGGTTGGCTCGCGTGGCGTGGGACGTGTCCTGCGCGGCAAGAAGATGGGGCCGGTTCCGGTGCCG
GTGGCCGAGCGGTGGCTTAAATATCGCGACGTTGACGCACCCCCGGCTGACACTTTCCGCACCTGGTGGAAGAAGAACAG
GGAGGCTCAGCGATGA

Upstream 100 bases:

>100_bases
CTGCCTCATGAATATCGGTGGTGTGCTGTCGCGCCAGAACTCGGGCGTTAAGCCGATTCACATCGCCGAAATCCTCGCCA
ACACTGAGGAGGACTGACCC

Downstream 100 bases:

>100_bases
CCACAATTAGCACTGATCCGGTGGCGCGTACCGAGATCCTCGCCCGGATTCGTCGCGCCAGCACTGACATCACCAATTCT
GACCCGGTCGCAGATGTGCC

Product: putative iron-sulfur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSTELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATMTIRNKRAMRVSESPDWQDLRDAAE
SIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRIVAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWET
DLAELIVQLGHDRPSHIVVPAIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELTNAARLHLREKFLRAEMAVSGGNFV
LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNPYNSVWSGVTDGDGPQEQHVI
FLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACN
EVCPVKIPFTDILLKLRNKVVKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP
VAERWLKYRDVDAPPADTFRTWWKKNREAQR

Sequences:

>Translated_511_residues
MSTELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATMTIRNKRAMRVSESPDWQDLRDAAE
SIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRIVAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWET
DLAELIVQLGHDRPSHIVVPAIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELTNAARLHLREKFLRAEMAVSGGNFV
LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNPYNSVWSGVTDGDGPQEQHVI
FLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACN
EVCPVKIPFTDILLKLRNKVVKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP
VAERWLKYRDVDAPPADTFRTWWKKNREAQR
>Mature_510_residues
STELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATMTIRNKRAMRVSESPDWQDLRDAAES
IKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRIVAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWETD
LAELIVQLGHDRPSHIVVPAIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELTNAARLHLREKFLRAEMAVSGGNFVL
ADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNPYNSVWSGVTDGDGPQEQHVIF
LDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGHAYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACNE
VCPVKIPFTDILLKLRNKVVKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVPV
AERWLKYRDVDAPPADTFRTWWKKNREAQR

Specific function: Unknown

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=482, Percent_Identity=39.2116182572614, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 57000; Mature: 56869

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATMTIRN
CCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCHHEEEEC
KRAMRVSESPDWQDLRDAAESIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRI
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
VAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWETDLAELIVQLGHDRPSHIVVP
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEE
AIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELTNAARLHLREKFLRAEMAVSGGNFV
CHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNP
EECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
YNSVWSGVTDGDGPQEQHVIFLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGH
HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
AYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACNEVCPVKIPFTDILLKLRNKV
CCCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHHHHHHCCCCCCCEECCHHHHHHHHHHHH
VKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP
HHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCC
VAERWLKYRDVDAPPADTFRTWWKKNREAQR
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STELRRVTYGNHGVARLTPAPDKPGTYMGMPKFSKAVKGELNLSVQRKNMRNATMTIRN
CCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCHHEEEEC
KRAMRVSESPDWQDLRDAAESIKNRVGRHLDHYLVEAEKNLTANGVHVHWARDGEEANRI
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
VAQIAKDKGVDEVVKIKSITSQETDLNEYLEEQGIAAWETDLAELIVQLGHDRPSHIVVP
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEE
AIHRNRAEVREIFLHEMKNYGRPAPEDISENPPELTNAARLHLREKFLRAEMAVSGGNFV
CHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
LADTGSLVIVESEGNGRMCLTLPDTLVSIVGIEKVLPSFDDLEVFLKLLPRSATGERMNP
EECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
YNSVWSGVTDGDGPQEQHVIFLDNGRTDVLADTLGREVLRCIRCASCINICPVYERAGGH
HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
AYGSVYPGPIGAVLNPQLRGVEHPVDRGLPYACSLCGACNEVCPVKIPFTDILLKLRNKV
CCCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHHHHHHCCCCCCCEECCHHHHHHHHHHHH
VKSEKADRIPQDYEVAGEMGLMKTASWAFSDHKHFEAIQVGSRGVGRVLRGKKMGPVPVP
HHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCC
VAERWLKYRDVDAPPADTFRTWWKKNREAQR
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]