| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is lutA [H]
Identifier: 50841655
GI number: 50841655
Start: 201645
End: 202439
Strand: Direct
Name: lutA [H]
Synonym: PPA0167
Alternate gene names: 50841655
Gene position: 201645-202439 (Clockwise)
Preceding gene: 50841654
Following gene: 50841656
Centisome position: 7.88
GC content: 60.38
Gene sequence:
>795_bases ATGACAACCACTACAAGCCCTGGCGCCAGGGCTACCTTGCCCGGCTTGCCGGGGGCGGGTATGACCGTCGGGCTGTTCAT TACGTGCATCAATGACGTGATGTTCCCTCAAACGGGCGTGGCCGTCACCACCCTGTTGGAGCGCCTCGGCTGCAAAGTTG AGTTCCCACGGGAACAGACCTGTTGCGCCCAGATGACGACCAACACCGGATACTTCGACGAGGGTATTCCGACCGTCCGT CAGTATGTGCGAGCCTTCGGAGACTACGACTATATCGTCGCACCCTCGGGGTCCTGTGTCGCCGCCGTCCGTGATCAGCA CCCGATGCTTGCCGAGTATGCCGGAGATTCTGGTCTGGCCAAGGAGGTCGAGCACACCAGTCAATGCACCTACGATCTAC CCGAGTTCCTCGTCGACATTCTCGGGGTCACTGACGTCGGCGCATATTTCCCGCATCGGGTGACGTATCACCCGTCCTGC CACGGCAAGCGGCTGCTGAACCTTGGTGATCGTCCCTACGAGCTGCTGCGTCACGTCAAAGGCATGACCCTGGTCGACCT TCCGATGGCCGAGCAGTGCTGCGGGTTCGGTGGCACCTTCTGCATCAAAAACCCCGATATGAGCGCGGCCATGGCTAACG ACAAGGCTCGCCACGTCCGCGAGACTGAGGCTGAGTACGTCGTCGCCGGCGATAACTCCTGCCTCATGAATATCGGTGGT GTGCTGTCGCGCCAGAACTCGGGCGTTAAGCCGATTCACATCGCCGAAATCCTCGCCAACACTGAGGAGGACTGA
Upstream 100 bases:
>100_bases CGTCGGCCTCATGTCGACCCCGGTGCTCGGATGGATGGTCCCCTGAATCTGCTGACGGTTGACACCGCCTGGCATCCGTT CATTATCAATGGAGGTCACC
Downstream 100 bases:
>100_bases CCCATGAGTACCGAACTGCGTCGCGTCACGTACGGAAACCACGGCGTCGCCCGGTTGACCCCAGCCCCCGACAAGCCCGG CACGTACATGGGCATGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTTTTSPGARATLPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPREQTCCAQMTTNTGYFDEGIPTVR QYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLAKEVEHTSQCTYDLPEFLVDILGVTDVGAYFPHRVTYHPSC HGKRLLNLGDRPYELLRHVKGMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG VLSRQNSGVKPIHIAEILANTEED
Sequences:
>Translated_264_residues MTTTTSPGARATLPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPREQTCCAQMTTNTGYFDEGIPTVR QYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLAKEVEHTSQCTYDLPEFLVDILGVTDVGAYFPHRVTYHPSC HGKRLLNLGDRPYELLRHVKGMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG VLSRQNSGVKPIHIAEILANTEED >Mature_263_residues TTTTSPGARATLPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPREQTCCAQMTTNTGYFDEGIPTVRQ YVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLAKEVEHTSQCTYDLPEFLVDILGVTDVGAYFPHRVTYHPSCH GKRLLNLGDRPYELLRHVKGMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGGV LSRQNSGVKPIHIAEILANTEED
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=41.4225941422594, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1788576, Length=226, Percent_Identity=27.8761061946903, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI48994913, Length=220, Percent_Identity=23.6363636363636, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 28622; Mature: 28491
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTSPGARATLPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPREQT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCHH CCAQMTTNTGYFDEGIPTVRQYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLA HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHHHCCCCCHH KEVEHTSQCTYDLPEFLVDILGVTDVGAYFPHRVTYHPSCHGKRLLNLGDRPYELLRHVK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCCHHHHHHHHC GMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG CCEEEECCCHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHCCCCEEEECCCCEEEHHHH VLSRQNSGVKPIHIAEILANTEED HHHCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TTTTSPGARATLPGLPGAGMTVGLFITCINDVMFPQTGVAVTTLLERLGCKVEFPREQT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCHH CCAQMTTNTGYFDEGIPTVRQYVRAFGDYDYIVAPSGSCVAAVRDQHPMLAEYAGDSGLA HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCHHHHHCCCCCHH KEVEHTSQCTYDLPEFLVDILGVTDVGAYFPHRVTYHPSCHGKRLLNLGDRPYELLRHVK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCCHHHHHHHHC GMTLVDLPMAEQCCGFGGTFCIKNPDMSAAMANDKARHVRETEAEYVVAGDNSCLMNIGG CCEEEECCCHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHCCCCEEEECCCCEEEHHHH VLSRQNSGVKPIHIAEILANTEED HHHCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]