| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841621
Identifier: 50841621
GI number: 50841621
Start: 158680
End: 160002
Strand: Direct
Name: 50841621
Synonym: PPA0132
Alternate gene names: NA
Gene position: 158680-160002 (Clockwise)
Preceding gene: 50841620
Following gene: 50841623
Centisome position: 6.2
GC content: 60.7
Gene sequence:
>1323_bases ATGAGTGTCGCCGAACGAACGGCAGCACGGCCGTTAGACCGTCAGGAGATGGCGAGTCGGGCCACGTCAGGGGTGTGGCT GGGCGCGGTCGCTGCCGTGCTGGTAATGCGGCTGCCCATGGGATTCCTCCTCTTCCTGATCGTGCCGTGGGTCATCCTGG CGGTGCAGACACGGTTTGCTTCCAGCCTCAGGGTGACCCCTCTCGTTGCGGTCGAGGTGTGCTGCATGGTGGCTTCCGGG ATGGCCGTGGTACTTTTCCACCCCGGACTCCTAACCGACACCGGGAACAGCGCCTTCATCATGCTCGCGGTTATAGGTGT GACCCTCGTGGTGTTCCGGTCAGCTGAGCCAGGTAGGACGGCTCGTCAGGTCCTTAGCGGCCTGTACTGGGGTGCAATCC TCGTTTGGCTTATTGGCATGGGAGAGATCGTGACCGGTGTCAAGCTGCTGCCACTGCTCTACCCGCGGGCCAACACGCTG GGTGCGGTGTCAAAGAATCGATGGGTTGTTACTGCAACCTACCCCAACTACAACGATTACGGTGTCGTCATGGCGATGCT TTTCACTGCTGTGCTGGCCCGGCTGTGGTTCAACCCGCGAAGAGGTGCGATTCGTCTCGGACGGTTGTTCGTCCTGGCGA CGTGTCTGGTGATGATCCTCATTGGCGGGTCGCGAGGCGCCCTCTTTGGCTGCATCTGTGCCGTCATGCTGTTGTTTGTC CTCAACGTTCGCCGTCTCCATACAGCCGCTATAGGGGTGCGTGCCTTCGTCTGGGGTGGAGCGCTTGTCATCGTGCTGGG TACCGGGCTGTGGATGAGTCCCTACGTCCAGGATCACTCCACAGCGGAACGTGGCACTATCATGGCCAACGCATTGTCGA TGACGTTGTCTAACCCGGCCGCCCTGCTCCTTGGATACGGCTCACTGTCGGAGTATCAAGCCCGGGCGTCGGCTCTGTAC GGACACGTTCTCATGGATCCGCACAATCTGCTATTGGAGATCGTCCTCCGCTACGGAGCGATCGCGATGATCCTTTTCGT TGTCTGTTGGTTGTGGATTCTGGTCCGTGGTTTCTTGCCGCGTCGACCCGTGGCCGACTGGCAGGCGGCCTTCGGTCTCA CCGTCGTAATGCTTTTCCCTGTGCTCGGCGTCGTTCCGTCATCAACCCTGCGGTATCACGTGACCTGGCTCTACCTTGTT GCGGCTAGCTCCATCACTGCAGAGACTGTCGCAGCAAACAGTGCCAGTGCCGGACGTCCGACACTAAGTCCGGAAGCGGT GACGCAAACCGAACGGTCAGCGGGGGGCCCTGGAGCGGCGTGA
Upstream 100 bases:
>100_bases TTGATGAAGCTTGCGACCGGGTCATGGCCGCACGGGACCAGCACACCTGGGCAGCCCGGGTGGAGGAGCTGGTCACGGCC CTGGCTGCGGTGGATCAACG
Downstream 100 bases:
>100_bases GGAGCGGTATTCCAGAACGCCCATGACGACCAGTCCGAGGATCAGGCCGGCAGCCACCCCCACCATCGGGGAGGAGAGCT TGGTGCTGTTCTTGTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSVAERTAARPLDRQEMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFASSLRVTPLVAVEVCCMVASG MAVVLFHPGLLTDTGNSAFIMLAVIGVTLVVFRSAEPGRTARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTL GAVSKNRWVVTATYPNYNDYGVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVMLLFV LNVRRLHTAAIGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSNPAALLLGYGSLSEYQARASALY GHVLMDPHNLLLEIVLRYGAIAMILFVVCWLWILVRGFLPRRPVADWQAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLV AASSITAETVAANSASAGRPTLSPEAVTQTERSAGGPGAA
Sequences:
>Translated_440_residues MSVAERTAARPLDRQEMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFASSLRVTPLVAVEVCCMVASG MAVVLFHPGLLTDTGNSAFIMLAVIGVTLVVFRSAEPGRTARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTL GAVSKNRWVVTATYPNYNDYGVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVMLLFV LNVRRLHTAAIGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSNPAALLLGYGSLSEYQARASALY GHVLMDPHNLLLEIVLRYGAIAMILFVVCWLWILVRGFLPRRPVADWQAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLV AASSITAETVAANSASAGRPTLSPEAVTQTERSAGGPGAA >Mature_439_residues SVAERTAARPLDRQEMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFASSLRVTPLVAVEVCCMVASGM AVVLFHPGLLTDTGNSAFIMLAVIGVTLVVFRSAEPGRTARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTLG AVSKNRWVVTATYPNYNDYGVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVMLLFVL NVRRLHTAAIGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSNPAALLLGYGSLSEYQARASALYG HVLMDPHNLLLEIVLRYGAIAMILFVVCWLWILVRGFLPRRPVADWQAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLVA ASSITAETVAANSASAGRPTLSPEAVTQTERSAGGPGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47291; Mature: 47160
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAERTAARPLDRQEMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFA CCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLRVTPLVAVEVCCMVASGMAVVLFHPGLLTDTGNSAFIMLAVIGVTLVVFRSAEPGRT HCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHH ARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTLGAVSKNRWVVTATYPNYNDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCH GVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVMLLFV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNVRRLHTAAIGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSNPA HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ALLLGYGSLSEYQARASALYGHVLMDPHNLLLEIVLRYGAIAMILFVVCWLWILVRGFLP EEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RRPVADWQAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLVAASSITAETVAANSASAGRP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TLSPEAVTQTERSAGGPGAA CCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure SVAERTAARPLDRQEMASRATSGVWLGAVAAVLVMRLPMGFLLFLIVPWVILAVQTRFA CCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLRVTPLVAVEVCCMVASGMAVVLFHPGLLTDTGNSAFIMLAVIGVTLVVFRSAEPGRT HCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHH ARQVLSGLYWGAILVWLIGMGEIVTGVKLLPLLYPRANTLGAVSKNRWVVTATYPNYNDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCH GVVMAMLFTAVLARLWFNPRRGAIRLGRLFVLATCLVMILIGGSRGALFGCICAVMLLFV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNVRRLHTAAIGVRAFVWGGALVIVLGTGLWMSPYVQDHSTAERGTIMANALSMTLSNPA HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ALLLGYGSLSEYQARASALYGHVLMDPHNLLLEIVLRYGAIAMILFVVCWLWILVRGFLP EEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RRPVADWQAAFGLTVVMLFPVLGVVPSSTLRYHVTWLYLVAASSITAETVAANSASAGRP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TLSPEAVTQTERSAGGPGAA CCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA