| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841614
Identifier: 50841614
GI number: 50841614
Start: 149143
End: 149664
Strand: Direct
Name: 50841614
Synonym: PPA0125
Alternate gene names: NA
Gene position: 149143-149664 (Clockwise)
Preceding gene: 50841612
Following gene: 50841615
Centisome position: 5.83
GC content: 63.79
Gene sequence:
>522_bases TTGCCACACGGGGCTCGAAGCACGTGCGGCGGATTCTTCGAGAACGCACCGTCGAACACTGGTGCTGCGAAGTCGTCTGA GCAGCGCCGTACTCTAGAGGGCATGCAGACGCAGCGAAACGTGGTTTCCCACGCTCTGCAACGCCGACACACCCTGGAGG CGTTGCGCAGCCCCCAGGTCGATCTCAGCGCCCCAACGGCGTGCGACGCCGACCCCATGCTGGTACGCGCCGCCATGCAC CATGGCGAGCCCCTCAACCACGACTGTCCGGTCTGTGAGTCCCCGCGCTTAGCCCTGCTGCGCCATGCTTTCGGCCACCA GCTGGGCCAATATTCGGGTCGCATCCGTACCCTGGACGAACTAGAGGAGATGGAGCACCAGTTCGGCGAGTTTCACGTCT ACGAGGTCGAGGTTTGCCCCGACTGTCTGTGGAATCACATCCTCGTCGACTACGTCCTAGGTGACGGTCGACGCCGCCGC CCACCTCGCCATCAGCCGACCGTGGAGGACATCTATGGCTGA
Upstream 100 bases:
>100_bases GGTAGTGGCTCGGGCCCCTCCACGAGACCGGTGTGGTGAATGTGTTGGGGACGGGGTTTGATGTCAGTAGGGGTGGTAAC TCTCACCTCTCCCACCCTGA
Downstream 100 bases:
>100_bases CCACAAACCCGCCAGAGCATCGAAGCGCCACGCCCCCGCGACTGGGGGCGGTGCCGGAAGGGCTCGTCGGGCCGCCGGGA GGCCTAGCCGTCATCCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPHGARSTCGGFFENAPSNTGAAKSSEQRRTLEGMQTQRNVVSHALQRRHTLEALRSPQVDLSAPTACDADPMLVRAAMH HGEPLNHDCPVCESPRLALLRHAFGHQLGQYSGRIRTLDELEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLGDGRRRR PPRHQPTVEDIYG
Sequences:
>Translated_173_residues MPHGARSTCGGFFENAPSNTGAAKSSEQRRTLEGMQTQRNVVSHALQRRHTLEALRSPQVDLSAPTACDADPMLVRAAMH HGEPLNHDCPVCESPRLALLRHAFGHQLGQYSGRIRTLDELEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLGDGRRRR PPRHQPTVEDIYG >Mature_172_residues PHGARSTCGGFFENAPSNTGAAKSSEQRRTLEGMQTQRNVVSHALQRRHTLEALRSPQVDLSAPTACDADPMLVRAAMHH GEPLNHDCPVCESPRLALLRHAFGHQLGQYSGRIRTLDELEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLGDGRRRRP PRHQPTVEDIYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19528; Mature: 19397
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHGARSTCGGFFENAPSNTGAAKSSEQRRTLEGMQTQRNVVSHALQRRHTLEALRSPQV CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLSAPTACDADPMLVRAAMHHGEPLNHDCPVCESPRLALLRHAFGHQLGQYSGRIRTLDE CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH LEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLGDGRRRRPPRHQPTVEDIYG HHHHHHHHCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure PHGARSTCGGFFENAPSNTGAAKSSEQRRTLEGMQTQRNVVSHALQRRHTLEALRSPQV CCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLSAPTACDADPMLVRAAMHHGEPLNHDCPVCESPRLALLRHAFGHQLGQYSGRIRTLDE CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH LEEMEHQFGEFHVYEVEVCPDCLWNHILVDYVLGDGRRRRPPRHQPTVEDIYG HHHHHHHHCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]