| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is glgP [H]
Identifier: 50841572
GI number: 50841572
Start: 88336
End: 90702
Strand: Direct
Name: glgP [H]
Synonym: PPA0081
Alternate gene names: 50841572
Gene position: 88336-90702 (Clockwise)
Preceding gene: 50841571
Following gene: 50841576
Centisome position: 3.45
GC content: 58.39
Gene sequence:
>2367_bases ATGACTCAGGACCTGGCTTCAGCAATCGCATTCCAGGTGCGATCGACCTCAGGACGTTCCGTTACTGCGTCGACCCCCAT GGAGGTGTGGCAGGGATTATCGGCCTGTGTCGTGGGCCGTATCGCAGATGACTGGCAGGCCACCGACGCTGCGTACAAAG CCGAGCGCCAGGAGCACTACTTCTCCGCTGAATTCCTCATGGGACGAGCCCTGCTCAATAACTTGTCGAACCTCGGACTC GTCAACGAGACCCGCGAGGCCCTCGCCAGTTTCGGTATCGATCTGTCCGAGGTGCTCGAACAAGAACCCGACGCTGCTCT AGGTAACGGTGGCCTAGGTCGTCTGGCCGCCTGCTTCCTCGATTCCTGCGCCACCCTGGAACTGCCTGTTACTGGTTACG GAATCCTCTACCGTTACGGCCTGTTCAAGCAGCTCTTCGACAACGGCTTCCAGACCGAACACCCAGACCCATGGATGGAG GAGGGCTACCCCTTCGTCATCCGTCGTGAAGAGCAACAGCGTATCGTTCGCTACGCCGACATGTGGGTGCGCGCCATCCC TCACGACATGCCGATCACCGGTTATGGGACCCGCAACGTCGGGACGCTGCGGCTGTGGAAAGCCGAGCCGATGGAACAGT TCGACTACCAGGCTTTCAACTCCCAGCGCTTCACTGACGCTATCGTCGAACGGGAGCGCACCTCCGACATTTCGCGCGTG CTCTACCCCAACGACACCACCTTCGAGGGCAAGGTGCTGCGGGTCCGTCAACAGTATTTCTTCTGCTCAGCCTCCCTGCA GGAGATCGTCGACAACTACATCGAGCACCACGGCGAGGACCTTACTGGCTTCGCTAAATACAACTCGATCCAGCTCAACG ACACCCATCCGGTGCTGTCCATCCCTGAGCTCATGCGCATCCTCCTCGATGAGCACGGTATGGGTTGGGACGAGGCGTGG GAGGTCGTTACCCATACCTTCGCCTACACCAATCACACCGTGCTGGCCGAAGCTCTCGAGAAGTGGGAAATGCAGATCTT CGATCGCCTGTTCCCGCGCATTTCCGAGATCGTTCGCGAGATTGACCGTCGTTTTCGCGAGGACATGAACAAGCGCGGTG TGGACGGTCAGACCATCGAGTACATGGCCCCGGTGAGCGGCAACCAGGTACGGATGGCGTGGATCGCCTGTTACGCCTCC TACTCCATCAACGGTGTCGCCGCCTTGCACACCGAGATCATTAAGCGCGAGACCCTCAAAGAGTGGCACGCAATCTGGCC GCAGCGGTTCAACAACAAGACCAACGGCGTCACTCCGCGTCGCTGGCTTAACCAGTGCAATCCGCGTCTGGCGAGTTTGC TGTCCGAGGTCACCGGCTCTGACACCTGGGTCAAGGACCTTTCAGTGCTCGCTAACTACACTGATTCCGTGGACGAGTCG GTCTACGACCGCATCAACGAGATCAAACACGCTAACAAGGTCGACTTCGCGGCTTGGGTAGCCGAGCGTGAGGGCGTCAA GATTGATCCGGACGCTATTTTTGACGTCCAAATCAAGCGACTGCACGAGTACAAGCGTCAATTGCTCAACGCCTTCTACG TGCTTGACCTCTACTTCCGCATCAAAGACGACCCGAGCCTCAACGTTCCGAAGCGGGTTTTCGTCTTTGGCGCTAAGGCC GCTCCCGGCTACATCCGTGCTAAGGCGATCATCAAATTCATCAACGAGGTGGCTCGTCTGGTCAATAACGACGAGGACAT CAACGGTCGGATCAAGGTCGTCTTTATTCACAACTACAACGTCTCCCCGGCCGAGCACATCATTCCGGCCGCTGACGTCT CCGAGCAGATTTCGATGGCCGGCAAGGAGGCCTCAGGTACTTCGAATATGAAGTTCATGATGAACGGCGCTCTCACCCTG GGCACCTTGGATGGGGCCAACGTCGAGATCCTCGACGCGGTAGGTGACGACAACGCCTACATTTTTGGTGCCACTGAGGA GCAGCTGCCTTCCCTCAAGCGGGACTACGATCCGCGTTGGCATTACGAAAATGTACCGGGCCTCAAGCGGGTTATTGATA CGCTGACCGACGGCACCCTCGACGACAATGGTTCTGGCTGGTTCCACGATCTGCGTCAAAGCCTCATGGAGCCCGGCTGG GAGGTTCCCGACGTCTACTATGTGTTGGGCGACTTCGCGTCCTACCGGGATGTCAAGGACAAGATGGCCGCTGATCATGC TGACGCCCGTGGTTGGGCGCGCAAGGCATGGGTGAACGTCACCAAGTCTGGTCGGTTCTCCTCTGACCGCACCATTCGCG ACTACGCCGAGCAAGTGTGGAAGCTGGAGCCGGTTAGGGCTGAGTGA
Upstream 100 bases:
>100_bases CGGACGGATTGGTCGGGCTCCGGGCCATACGTCTGATCCGCGGTAGTGTGAACGCAATGTACCAGCCGCGGTGCGGCGCA CCCATATCCAAGGAAGGCAC
Downstream 100 bases:
>100_bases GCTCCGGGGGCTGATAGCGCATCGTGGGGTCCGGGCTGGTCGCGGACCGCGTGTGTAGCTGTGGTCAGCCCCACAGGGCT TTAGCTGTCACCGTGAGCAG
Product: carbohydrate phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MTQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHYFSAEFLMGRALLNNLSNLGL VNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFLDSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWME EGYPFVIRREEQQRIVRYADMWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLSIPELMRILLDEHGMGWDEAW EVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVREIDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYAS YSINGVAALHTEIIKRETLKEWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFRIKDDPSLNVPKRVFVFGAKA APGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYNVSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTL GTLDGANVEILDAVGDDNAYIFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVWKLEPVRAE
Sequences:
>Translated_788_residues MTQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHYFSAEFLMGRALLNNLSNLGL VNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFLDSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWME EGYPFVIRREEQQRIVRYADMWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLSIPELMRILLDEHGMGWDEAW EVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVREIDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYAS YSINGVAALHTEIIKRETLKEWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFRIKDDPSLNVPKRVFVFGAKA APGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYNVSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTL GTLDGANVEILDAVGDDNAYIFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVWKLEPVRAE >Mature_787_residues TQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHYFSAEFLMGRALLNNLSNLGLV NETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFLDSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWMEE GYPFVIRREEQQRIVRYADMWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRVL YPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLSIPELMRILLDEHGMGWDEAWE VVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVREIDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYASY SINGVAALHTEIIKRETLKEWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDESV YDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFRIKDDPSLNVPKRVFVFGAKAA PGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYNVSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTLG TLDGANVEILDAVGDDNAYIFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGWE VPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVWKLEPVRAE
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=796, Percent_Identity=41.9597989949749, Blast_Score=593, Evalue=1e-169, Organism=Homo sapiens, GI71037379, Length=795, Percent_Identity=41.8867924528302, Blast_Score=593, Evalue=1e-169, Organism=Homo sapiens, GI21361370, Length=795, Percent_Identity=41.8867924528302, Blast_Score=583, Evalue=1e-166, Organism=Homo sapiens, GI255653002, Length=700, Percent_Identity=42, Blast_Score=563, Evalue=1e-160, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=41.3173652694611, Blast_Score=518, Evalue=1e-147, Organism=Escherichia coli, GI48994936, Length=798, Percent_Identity=43.2330827067669, Blast_Score=632, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=804, Percent_Identity=42.6616915422886, Blast_Score=624, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17564550, Length=793, Percent_Identity=41.6141235813367, Blast_Score=605, Evalue=1e-173, Organism=Caenorhabditis elegans, GI32566204, Length=793, Percent_Identity=41.6141235813367, Blast_Score=605, Evalue=1e-173, Organism=Saccharomyces cerevisiae, GI6325418, Length=844, Percent_Identity=40.2843601895735, Blast_Score=569, Evalue=1e-163, Organism=Drosophila melanogaster, GI78706832, Length=793, Percent_Identity=41.9924337957125, Blast_Score=599, Evalue=1e-171, Organism=Drosophila melanogaster, GI24581010, Length=793, Percent_Identity=41.9924337957125, Blast_Score=599, Evalue=1e-171,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 89923; Mature: 89792
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHY CCHHHHHHHHHHHCCCCCCEEECCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH FSAEFLMGRALLNNLSNLGLVNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHH DSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWMEEGYPFVIRREEQQRIVRYAD CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHH MWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV HHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHEE LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLS ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCC IPELMRILLDEHGMGWDEAWEVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVRE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYASYSINGVAALHTEIIKRETLK HHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH EWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES HHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFR HHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE IKDDPSLNVPKRVFVFGAKAAPGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYN ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC VSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAY CCHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEECCCCCEE IFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EEECCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVW CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH KLEPVRAE CCCCCCCC >Mature Secondary Structure TQDLASAIAFQVRSTSGRSVTASTPMEVWQGLSACVVGRIADDWQATDAAYKAERQEHY CHHHHHHHHHHHCCCCCCEEECCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH FSAEFLMGRALLNNLSNLGLVNETREALASFGIDLSEVLEQEPDAALGNGGLGRLAACFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHH DSCATLELPVTGYGILYRYGLFKQLFDNGFQTEHPDPWMEEGYPFVIRREEQQRIVRYAD CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHH MWVRAIPHDMPITGYGTRNVGTLRLWKAEPMEQFDYQAFNSQRFTDAIVERERTSDISRV HHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHEE LYPNDTTFEGKVLRVRQQYFFCSASLQEIVDNYIEHHGEDLTGFAKYNSIQLNDTHPVLS ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCC IPELMRILLDEHGMGWDEAWEVVTHTFAYTNHTVLAEALEKWEMQIFDRLFPRISEIVRE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDRRFREDMNKRGVDGQTIEYMAPVSGNQVRMAWIACYASYSINGVAALHTEIIKRETLK HHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH EWHAIWPQRFNNKTNGVTPRRWLNQCNPRLASLLSEVTGSDTWVKDLSVLANYTDSVDES HHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VYDRINEIKHANKVDFAAWVAEREGVKIDPDAIFDVQIKRLHEYKRQLLNAFYVLDLYFR HHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE IKDDPSLNVPKRVFVFGAKAAPGYIRAKAIIKFINEVARLVNNDEDINGRIKVVFIHNYN ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC VSPAEHIIPAADVSEQISMAGKEASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAY CCHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEECCCCCEE IFGATEEQLPSLKRDYDPRWHYENVPGLKRVIDTLTDGTLDDNGSGWFHDLRQSLMEPGW EEECCHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC EVPDVYYVLGDFASYRDVKDKMAADHADARGWARKAWVNVTKSGRFSSDRTIRDYAEQVW CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH KLEPVRAE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]