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The map label for this gene is araQ [H]

Identifier: 50841547

GI number: 50841547

Start: 56040

End: 56870

Strand: Reverse

Name: araQ [H]

Synonym: PPA0057

Alternate gene names: 50841547

Gene position: 56870-56040 (Counterclockwise)

Preceding gene: 50841548

Following gene: 50841546

Centisome position: 2.22

GC content: 57.64

Gene sequence:

>831_bases
ATGAGACGGCGGGTGCACATCGGGGCGTTCTTCCGACACCTGTTCCTCATTCTGGGCGGGCTGATCTCGCTATTCCCGTT
CTACTGGATGTTCGTGCTAGCCAGCCGGCCATCCTCAGTGATCTACAAGTATCCTCCGGTCCTTACCCCCGGCAACCGTC
TGGGCGAGAACGTTCATACCATCACCGATAAGGTCAACATTTGGGCGGCTATGGCCAACACGGCTCTCGTGGCGACCACG
GTGTCGGTACTTGTGTTACTCATCTCGTCGCTGGCAGCTTTCGCCTTCGCCAAGTTCGATTTTCCCGGCAGGAACGTGCT
CTTCGTGATTGTCCTGGCGACATTCTTGCTTCCCACCCAACTCGCGACGATCCCGCAGTTCGTCCTCATGAGCAAGATCG
GGTGGGTAGGCGACCTCAAGGCCGTCATCGTGCCCTCCCTAGCCAGCTCGTTCGGGGTGTTTTGGCTGCGACAGTACGCT
ACGAATGCCATCCCGAAGGAACTGCTGGAGGCTGCCACGCTAGATGGGTGCGGGTTCTGGCACCAGTACGTGCACGTGTG
CCTACCGATTATTCGTCCTGCCATGGCATTCTTGGGGATCTTCACCTTCATCGGCTCGTGGAATGACTTCATGTGGCCCC
TTATCGTCCTCAACGATCCCAGCAAACTGACCCTGCAGGTAGCCTTGAGCCAACTCAAGACGGCACACGGCACCGACTAC
GGCATGCTCATGGCTTCTTCGCTCATTGCTGTCGTCCCACTGCTCGTCGTGTTTGTCATCGGTGCCAAGCAACTCATCGC
CGGTATCTCGGAGGGAGCAGTCAAGAGTTAA

Upstream 100 bases:

>100_bases
GCTATGGAGCGACGATCGCCTGGGGAGTATTCGTCGTTGTGCTGTTCTTCTCGATCATTAACTGGCTCGTTACCCGCGAG
CATGATCGCAAGGTGGCACG

Downstream 100 bases:

>100_bases
GCCGCATCGAGGAGAGGCCAACCACGGCGGCAACGCTGTCGATCGAAACCGCATCGCGCCCAGGGGTTCTCGTTGCTGAG
GTTCGCCAGAACGTGCCTGT

Product: sugar transport permease BglB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHTITDKVNIWAAMANTALVATT
VSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQLATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYA
TNAIPKELLEAATLDGCGFWHQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY
GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS

Sequences:

>Translated_276_residues
MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHTITDKVNIWAAMANTALVATT
VSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQLATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYA
TNAIPKELLEAATLDGCGFWHQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY
GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS
>Mature_276_residues
MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHTITDKVNIWAAMANTALVATT
VSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQLATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYA
TNAIPKELLEAATLDGCGFWHQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY
GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=28.5185185185185, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1787571, Length=272, Percent_Identity=25, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=25.7142857142857, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30300; Mature: 30300

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHT
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCHHHH
ITDKVNIWAAMANTALVATTVSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYATNAIPKELLEAATLDGCGFW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
HQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCH
GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRRVHIGAFFRHLFLILGGLISLFPFYWMFVLASRPSSVIYKYPPVLTPGNRLGENVHT
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCHHHH
ITDKVNIWAAMANTALVATTVSVLVLLISSLAAFAFAKFDFPGRNVLFVIVLATFLLPTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LATIPQFVLMSKIGWVGDLKAVIVPSLASSFGVFWLRQYATNAIPKELLEAATLDGCGFW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH
HQYVHVCLPIIRPAMAFLGIFTFIGSWNDFMWPLIVLNDPSKLTLQVALSQLKTAHGTDY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCH
GMLMASSLIAVVPLLVVFVIGAKQLIAGISEGAVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]