| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841499
Identifier: 50841499
GI number: 50841499
Start: 3666
End: 4169
Strand: Direct
Name: 50841499
Synonym: PPA0003
Alternate gene names: NA
Gene position: 3666-4169 (Clockwise)
Preceding gene: 161621802
Following gene: 50841500
Centisome position: 0.14
GC content: 60.91
Gene sequence:
>504_bases ATGCTGCGCTTGCAGGCGTGGCAGACGGTTCTTGCGAAACTGTGTGACGTTGACGTCGACACCATGGCCAAAGGTCGGGG CCGGTTGCAGCAGCGGTGGTCAAGCCCTCACAGCGACACGTTGCCTCTGTACGTGTCGGTGGTGACTTTTGACCAGGTTC CTTTTGTCGGGCTGTCCGCCACCTCGGATGCCGATCCCTTCGACATCATCCCGGATTGCGCTTGTGATGCCTGCGACCAT GGTTCGGAAGATCTTTTGCGGGTTCTTGACGCGGACTTGGCGGCCGTCGTTGACGGTAGCCTCGTCGTTGTCACTGGGCC GGTGGTCAATGGTGAGCCGACATTCCATCTCGTCGGTACCGGACAGGGCTGCGCGTCGACCTGGGGAGGGGATGAGGTTG GCCCATTAGCCGAGCCGGAAGCCGTTATTGACGCTATTCGCAGTGGGGATGACCCGTTGCTGCCACCTGGATGCACCGTC CTACATGGCAGACCGTGGCTGTGA
Upstream 100 bases:
>100_bases CCTCGGTGCGCCTTCCTGGTCGAATCCGCACGCTGATCATTCCGTTGCTGCCGAGGAGGAGTACAGCAGGGTCACTGACC CTGAGAGGTACCACGTCCTC
Downstream 100 bases:
>100_bases ACATGTCTGTCCGGTAACCTGGCTCGGACGGCCTGAATGTGGTCGGAGGGGGTCCGGATGTTCGTTGAGCACCTCGAACT GGTTGATTTCCGTTCCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLRLQAWQTVLAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSATSDADPFDIIPDCACDACDH GSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGTGQGCASTWGGDEVGPLAEPEAVIDAIRSGDDPLLPPGCTV LHGRPWL
Sequences:
>Translated_167_residues MLRLQAWQTVLAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSATSDADPFDIIPDCACDACDH GSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGTGQGCASTWGGDEVGPLAEPEAVIDAIRSGDDPLLPPGCTV LHGRPWL >Mature_167_residues MLRLQAWQTVLAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSATSDADPFDIIPDCACDACDH GSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGTGQGCASTWGGDEVGPLAEPEAVIDAIRSGDDPLLPPGCTV LHGRPWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17647; Mature: 17647
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLQAWQTVLAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEC TSDADPFDIIPDCACDACDHGSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCEEEEEC GQGCASTWGGDEVGPLAEPEAVIDAIRSGDDPLLPPGCTVLHGRPWL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MLRLQAWQTVLAKLCDVDVDTMAKGRGRLQQRWSSPHSDTLPLYVSVVTFDQVPFVGLSA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEC TSDADPFDIIPDCACDACDHGSEDLLRVLDADLAAVVDGSLVVVTGPVVNGEPTFHLVGT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCEEEEEC GQGCASTWGGDEVGPLAEPEAVIDAIRSGDDPLLPPGCTVLHGRPWL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA